CAFE: an R package for the detection of gross chromosomal abnormalities from gene expression microarray data

被引：4
|
作者：
Bollen, Sander [1 ,2 ]
Leddin, Mathias [3 ]
Andrade-Navarro, Miguel A. [1 ]
Mah, Nancy [1 ]
机构：
[1] Max Delbruck Ctr Mol Med, Computat Biol & Data Min Grp, D-13125 Berlin, Germany
[2] Univ Utrecht, Grad Sch Life Sci, NL-3584 CG Utrecht, Netherlands
[3] Roche Diagnost GmbH, D-82377 Penzberg, Germany
来源：
BIOINFORMATICS | 2014年 / 30卷 / 10期
关键词：
STEM-CELLS;
D O I：
10.1093/bioinformatics/btu028
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
The current methods available to detect chromosomal abnormalities from DNA microarray expression data are cumbersome and inflexible. CAFE has been developed to alleviate these issues. It is implemented as an R package that analyzes Affymetrix*. CEL files and comes with flexible plotting functions, easing visualization of chromosomal abnormalities.
引用
收藏
页码：1484 / 1485
页数：2
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