CAFE: an R package for the detection of gross chromosomal abnormalities from gene expression microarray data

被引：4

作者：

Bollen, Sander ^{[1
,2
]}

Leddin, Mathias ^{[3
]}

Andrade-Navarro, Miguel A. ^{[1
]}

Mah, Nancy ^{[1
]}

机构：

[1] Max Delbruck Ctr Mol Med, Computat Biol & Data Min Grp, D-13125 Berlin, Germany

[2] Univ Utrecht, Grad Sch Life Sci, NL-3584 CG Utrecht, Netherlands

[3] Roche Diagnost GmbH, D-82377 Penzberg, Germany

来源：

BIOINFORMATICS | 2014年 / 30卷 / 10期

关键词：

STEM-CELLS;

D O I：

10.1093/bioinformatics/btu028

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

The current methods available to detect chromosomal abnormalities from DNA microarray expression data are cumbersome and inflexible. CAFE has been developed to alleviate these issues. It is implemented as an R package that analyzes Affymetrix*. CEL files and comes with flexible plotting functions, easing visualization of chromosomal abnormalities.

引用

页码：1484 / 1485

页数：2

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