Molecular generative model based on conditional variational autoencoder for de novo molecular design

被引:0
|
作者
Jaechang Lim
Seongok Ryu
Jin Woo Kim
Woo Youn Kim
机构
[1] KAIST,Department of Chemistry
[2] KAIST,KI for Artificial Intelligence
来源
Journal of Cheminformatics | / 10卷
关键词
Molecular design; Conditional variational autoencoder; Deep learning;
D O I
暂无
中图分类号
学科分类号
摘要
We propose a molecular generative model based on the conditional variational autoencoder for de novo molecular design. It is specialized to control multiple molecular properties simultaneously by imposing them on a latent space. As a proof of concept, we demonstrate that it can be used to generate drug-like molecules with five target properties. We were also able to adjust a single property without changing the others and to manipulate it beyond the range of the dataset.[graphic not available: see fulltext]
引用
收藏
相关论文
共 50 条
  • [11] Generative model based on junction tree variational autoencoder for HOMO value prediction and molecular optimization
    Kondratyev, Vladimir
    Dryzhakov, Marian
    Gimadiev, Timur
    Slutskiy, Dmitriy
    JOURNAL OF CHEMINFORMATICS, 2023, 15 (01)
  • [12] Molecular Generative Model Based on an Adversarially Regularized Autoencoder
    Hong, Seung Hwan
    Ryu, Seongok
    Lim, Jaechang
    Kim, Woo Youn
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2020, 60 (01) : 29 - 36
  • [13] Generative model based on junction tree variational autoencoder for HOMO value prediction and molecular optimization
    Vladimir Kondratyev
    Marian Dryzhakov
    Timur Gimadiev
    Dmitriy Slutskiy
    Journal of Cheminformatics, 15
  • [14] druGAN: An Advanced Generative Adversarial Autoencoder Model for de Novo Generation of New Molecules with Desired Molecular Properties in Silico
    Kadurin, Artur
    Nikolenko, Sergey
    Khrabrov, Kuzma
    Aliper, Alex
    Zhavoronkov, Alex
    MOLECULAR PHARMACEUTICS, 2017, 14 (09) : 3098 - 3104
  • [15] Multi-objective de novo drug design with conditional graph generative model
    Li, Yibo
    Zhang, Liangren
    Liu, Zhenming
    JOURNAL OF CHEMINFORMATICS, 2018, 10
  • [16] Multi-objective de novo drug design with conditional graph generative model
    Yibo Li
    Liangren Zhang
    Zhenming Liu
    Journal of Cheminformatics, 10
  • [17] MGCVAE: Multi-Objective Inverse Design via Molecular Graph Conditional Variational Autoencoder
    Lee, Myeonghun
    Min, Kyoungmin
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2022, 62 (12) : 2943 - 2950
  • [18] Conditional Variational Autoencoder and generative adversarial network-based for fault for the motor
    Huang, Mei
    Sheng, Chenxing
    Rao, Xiang
    MEASUREMENT, 2025, 242
  • [19] Conditional Molecular Design with Deep Generative Models
    Kang, Seokho
    Cho, Kyunghyun
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2019, 59 (01) : 43 - 52
  • [20] De novo Molecular Design with Generative Long Short-term Memory
    Grisoni, Francesca
    Schneider, Gisbert
    CHIMIA, 2019, 73 (12) : 1006 - 1011