Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition

被引：0

作者：

Ilya M. Flyamer

Johanna Gassler

Maxim Imakaev

Hugo B. Brandão

Sergey V. Ulianov

Nezar Abdennur

Sergey V. Razin

Leonid A. Mirny

Kikuë Tachibana-Konwalski

机构：

[1] IMBA - Institute of Molecular Biotechnology of the Austrian Academy of Sciences,Department of Physics

[2] Vienna Biocenter (VBC),undefined

[3] Institute of Gene Biology,undefined

[4] Russian Academy of Sciences,undefined

[5] Faculty of Biology,undefined

[6] Lomonosov Moscow State University,undefined

[7] Institute for Medical Engineering and Science,undefined

[8] Massachusetts Institute of Technology (MIT),undefined

[9] Massachusetts Institute of Technology (MIT),undefined

[10] Harvard Program in Biophysics,undefined

[11] Harvard University,undefined

[12] Computational and Systems Biology Program,undefined

[13] Massachusetts Institute of Technology (MIT),undefined

[14] ,undefined

[15] †Present address: MRC Human Genetics Unit,undefined

[16] Institute of Genetics and Molecular Medicine,undefined

[17] University of Edinburgh,undefined

[18] Edinburgh EH4 2XU,undefined

[19] UK.,undefined

来源：

Nature | 2017年 / 544卷

关键词：

D O I：

暂无

中图分类号：

学科分类号：

摘要：

Using a single-nucleus Hi-C protocol, the authors find that spatial organization of chromatin during oocyte-to-zygote transition differs between paternal and maternal nuclei within a single-cell zygote.

引用

页码：110 / 114

页数：4

共 47 条

[1] Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition
Flyamer, Ilya M.
Gassler, Johanna
Imakaev, Maxim
Brandao, Hugo B.
Ulianov, Sergey V.
Abdennur, Nezar
Razin, Sergey V.
Mirny, Leonid A.
Tachibana-Konwalski, Kikue
NATURE, 2017, 544 (7648) : 110 - +
[2] Single-nucleus Hi-C of mammalian oocytes and zygotes
Gassler, Johanna
Flyamer, Ilya M.
Tachibana, Kikue
MITOSIS AND MEIOSIS, PT A, 2018, 144 : 389 - 407
[3] Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts
Ay, Ferhat
Bailey, Timothy L.
Noble, William Stafford
GENOME RESEARCH, 2014, 24 (06) : 999 - 1011
[4] Genome-wide analysis of translation reveals a critical role for deleted in azoospermia-like (Dazl) at the oocyte-to-zygote transition
Chen, Jing
Melton, Collin
Suh, Nayoung
Oh, Jeong Su
Horner, Kathleen
Xie, Fang
Sette, Claudio
Blelloch, Robert
Conti, Marco
GENES & DEVELOPMENT, 2011, 25 (07) : 755 - 766
[5] Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness
H. M. A. Mohit Chowdhury
Terrance Boult
Oluwatosin Oluwadare
BMC Bioinformatics, 25
[6] Hi-C interaction graph analysis reveals the impact of histone modifications in chromatin shape
Sefer, Emre
APPLIED NETWORK SCIENCE, 2021, 6 (01)
[7] Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness
Chowdhury, H. M. A. Mohit
Boult, Terrance
Oluwadare, Oluwatosin
BMC BIOINFORMATICS, 2024, 25 (01)
[8] Genome-wide Hi-C analysis reveals extensive hierarchical chromatin interactions in rice
Dong, Qianli
Li, Ning
Li, Xiaochong
Yuan, Zan
Xie, Dejian
Wang, Xiaofei
Li, Jianing
Yu, Yanan
Wang, Jinbin
Ding, Baoxu
Zhang, Zhibin
Li, Changping
Bian, Yao
Zhang, Ai
Wu, Ying
Liu, Bao
Gong, Lei
PLANT JOURNAL, 2018, 94 (06): : 1141 - 1156
[9] Genome-wide Hi-C analysis reveals extensive hierarchical chromatin interactions in rice
Key Laboratory of Molecular Epigenetics of the Ministry of Education , Northeast Normal University, Changchun
130024, China
不详
100176, China
Plant J., 1600, 6 (1141-1156):
[10] Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages
Lan, Xun
Witt, Heather
Katsumura, Koichi
Ye, Zhenqing
Wang, Qianben
Bresnick, Emery H.
Farnham, Peggy J.
Jin, Victor X.
NUCLEIC ACIDS RESEARCH, 2012, 40 (16) : 7690 - 7704

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