A new method for peak detection in two-dimensional chromatography is presented. In a first step, the method starts with a conventional one-dimensional peak detection algorithm to detect constructed to decide which of the individual one-dimensional peaks modulated peaks. In a second step, a sophisticated algorithm is have been originated from the same compound and should then be arranged in a two-dimensional peak. The merging algorithm is based on Bayesian inference. The user sets prior information about certain parameters (e.g., second-dimension retention time variability, first-dimension band broadening, chromatographic noise). On the basis of these priors, the algorithm calculates the probability of myriads of peak arrangements (i.e., ways of merging one-dimensional peaks), finding which of them holds the highest value. Uncertainty in each parameter can be accounted by adapting conveniently its probability distribution function, which in turn may change the final decision of the most probable peak arrangement. It has been demonstrated that the Bayesian approach presented in this paper follows the chromatographers' intuition. The algorithm has been applied and tested with LC x LC and GC x GC data and takes around 1 min to process chromatograms with several thousands of peaks.
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Wayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USAWayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USA
Jang, Hyejeong
Koo, Imhoi
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Univ Louisville, Dept Chem, Louisville, KY 40292 USA
Univ Louisville, Ctr Regulatory & Environm Analyt Metabol, Louisville, KY 40292 USAWayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USA
Koo, Imhoi
Lee, Joohyoung
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Wayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USA
Wayne State Univ, Sch Med, Dept Family Med & Publ Hlth Sci, Detroit, MI USAWayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USA
Lee, Joohyoung
Zhang, Xiang
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Univ Louisville, Dept Chem, Louisville, KY 40292 USA
Univ Louisville, Ctr Regulatory & Environm Analyt Metabol, Louisville, KY 40292 USAWayne State Univ, Sch Med, Dept Oncol, Biostat Core,Karmanos Canc Inst, Detroit, MI 48201 USA