Methods for sequential resonance assignment in solid, uniformly 13C, 15N labelled peptides:: Quantification and application to antamanide

被引:88
|
作者
Detken, A
Hardy, EH
Ernst, M
Kainosho, M
Kawakami, T
Aimoto, S
Meier, BH [1 ]
机构
[1] ETH Honggerberg, Phys Chem Lab, CH-8093 Zurich, Switzerland
[2] Tokyo Metropolitan Univ, CREST, Japan Sci & Technol Corp, Hachioji, Tokyo 1920397, Japan
[3] Osaka Univ, Inst Prot Res, Suita, Osaka 5650871, Japan
关键词
adiabatic; antamanide; assignment; cross polarization; DREAM; MAS; polarization transfer; solid-state NMR; TOBSY; TOSSY;
D O I
10.1023/A:1011212100630
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The application of adiabatic polarization-transfer experiments to resonance assignment in solid, uniformly C-13-N-15-labelled polypeptides is demonstrated for the cyclic decapeptide antamanide. A homonuclear correlation experiment employing the DREAM sequence for adiabatic dipolar transfer yields a complete assignment of the C-alpha and aliphatic side-chain C-13 resonances to amino acid types. The same information can be obtained from a TOBSY experiment using the recently introduced P9(12)(1) TOBSY sequence, which employs the J couplings as a transfer mechanism. A comparison of the two methods is presented. Except for some aromatic phenylalanine resonances, a complete sequence-specific assignment of the C-13 and N-15 resonances in antamanide is achieved by a series of selective or broadband adiabatic triple-resonance experiments. Heteronuclear transfer by adiabatic-passage Hartmann-Hahn cross polarization is combined with adiabatic homonuclear transfer by the DREAM and rotational-resonance tickling sequences into two- and three-dimensional experiments. The performance of these experiments is evaluated quantitatively.
引用
收藏
页码:203 / 221
页数:19
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