Brief validation of the novel GeneXpert Xpress SARS-CoV-2 PCR assay

被引:34
|
作者
Goldenberger, Daniel [1 ,2 ]
Leuzinger, Karoline [3 ]
Sogaard, Kirstine K. [1 ,2 ,4 ]
Gosert, Rainer [3 ]
Roloff, Tim [1 ,2 ,4 ]
Naegele, Klaudia [3 ]
Cuenod, Aline [4 ]
Mari, Alfredo [4 ]
Seth-Smith, Helena [1 ,2 ,4 ]
Rentsch, Katharina [5 ]
Hinic, Vladimira [1 ,2 ]
Hirsch, Hans H. [3 ,6 ,7 ]
Egli, Adrian [1 ,2 ,4 ]
机构
[1] Univ Hosp Basel, Lab Med, Clin Bacteriol & Mycol, Basel, Switzerland
[2] Univ Basel, Basel, Switzerland
[3] Univ Hosp Basel, Lab Med, Clin Virol, Basel, Switzerland
[4] Univ Basel, Dept Biomed, Lab Med, Appl Microbiol Res, Basel, Switzerland
[5] Univ Hosp Basel, Lab Med, Basel, Switzerland
[6] Univ Hosp Basel, Infect Dis & Hosp Epidemiol, Basel, Switzerland
[7] Univ Basel, Dept Biomed, Transplantat & Clin Virol, Basel, Switzerland
关键词
SARS-CoV-2; COVID-19; GeneXpert; Respiratory infection; Viruses; Diagnostics; PCR; NAT; COBAS; 6800;
D O I
10.1016/j.jviromet.2020.113925
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The clinical and epidemiologic management of the SARS-CoV-2 pandemic is critically dependent on molecular assays with short turn-around time. We validated the novel Xpert Xpress SARS-CoV-2 assay using a commercial nucleic acid testing (Roche Cobas 6800). We found an excellent concordance over a range of SARS-CoV-2 loads and across established human coronaviruses.
引用
收藏
页数:3
相关论文
共 50 条
  • [31] Test Agreement between Roche Cobas 6800 and Cepheid GeneXpert Xpress SARS-CoV-2 Assays at High Cycle Threshold Ranges
    Broder, Kari
    Babiker, Ahmed
    Myers, Charles
    White, Terri
    Jones, Heather
    Cardella, John
    Burd, Eileen M.
    Hill, Charles E.
    Kraft, Colleen S.
    JOURNAL OF CLINICAL MICROBIOLOGY, 2020, 58 (08)
  • [32] Quadruplex Droplet Digital PCR Assay for Screening and Quantification of SARS-CoV-2
    Li, Rong
    Zhu, Zaobing
    Guo, Yongkun
    Yang, Litao
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (15)
  • [33] Evaluation of the Xpert Xpress SARS-CoV-2/Flu/RSV Assay for Simultaneous Detection of SARS-CoV-2, Influenza A and B Viruses, and Respiratory Syncytial Virus in Nasopharyngeal Specimens
    Leung, Eddie Chi-man
    Chow, Viola Chi-ying
    Lee, May Kin-ping
    Tang, Kevin Pui-san
    Li, Daniel Kwok-cheung
    Lai, Raymond Wai-man
    JOURNAL OF CLINICAL MICROBIOLOGY, 2021, 59 (04)
  • [34] Clinical evaluation of AusDiagnostics SARS-CoV-2 multiplex tandem PCR assay
    Attwood, Lucy O.
    Francis, Michelle J.
    Hamblin, John
    Korman, Tony M.
    Druce, Julian
    Graham, Maryza
    JOURNAL OF CLINICAL VIROLOGY, 2020, 128
  • [35] A new qualitative RT-PCR assay detecting SARS-CoV-2
    Favaro, Marco
    Mattina, Walter
    Pistoia, Enrico Salvatore
    Gaziano, Roberta
    Di Francesco, Paolo
    Middleton, Simon
    D'Angelo, Silvia
    Altarozzi, Tullio
    Fontana, Carla
    SCIENTIFIC REPORTS, 2021, 11 (01)
  • [36] A new qualitative RT-PCR assay detecting SARS-CoV-2
    Marco Favaro
    Walter Mattina
    Enrico Salvatore Pistoia
    Roberta Gaziano
    Paolo Di Francesco
    Simon Middleton
    Silvia D’Angelo
    Tullio Altarozzi
    Carla Fontana
    Scientific Reports, 11
  • [37] Presumptive positive with the Cepheid Xpert Xpress SARS-CoV-2 assay due to N mutations in the Delta variant
    Choi, Hosoon
    Hwang, Munok
    Lukey, Janell
    Jinadatha, Chetan
    Navarathna, Dhammika H.
    DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2022, 103 (03)
  • [38] Preclinical Validation of a Novel Injection-Molded Swab for the Molecular Assay Detection of SARS-CoV-2
    Ghezzi, Chiara E.
    Hartigan, Devon R.
    Hardick, Justin P.
    Gore, Rebecca
    Adelfio, Miryam
    Diaz, Anyelo R.
    McGuinness, Pamela D.
    Robinson, Matthew L.
    Buchholz, Bryan O.
    Manabe, Yukari C.
    DIAGNOSTICS, 2022, 12 (01)
  • [39] Parallel testing of 241 clinical nasopharyngeal swabs for the detection of SARS-CoV-2 virus on the Cepheid Xpert Xpress SARS-CoV-2 and the Roche cobas SARS-CoV-2 assays
    Tham, Jason Wei Ming
    Ng, Shu Chi
    Chai, Chean Nee
    Png, Siyu
    Tan, Eunice Jia Min
    Ng, Li Jie
    Chua, Rui Ping
    Sani, Musa
    Chiang, Donald
    Tan, Ker Xin
    Tee, Nancy Wen Sim
    Jureen, Roland
    Tan, Shaun S.
    Yan, Gabriel
    Yan, Benedict
    Lee, Chun Kiat
    CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 2021, 59 (02) : E45 - E48
  • [40] Asymptomatic Patient Testing After 10:1 Pooling Using the Xpert Xpress SARS-CoV-2 Assay
    Procop, Gary W.
    Tuohy, Marion
    Ramsey, Christine
    Rhoads, Daniel D.
    Rubin, Brian P.
    Figler, Richard
    AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2021, 155 (04) : 522 - 526