Brief validation of the novel GeneXpert Xpress SARS-CoV-2 PCR assay

被引:34
|
作者
Goldenberger, Daniel [1 ,2 ]
Leuzinger, Karoline [3 ]
Sogaard, Kirstine K. [1 ,2 ,4 ]
Gosert, Rainer [3 ]
Roloff, Tim [1 ,2 ,4 ]
Naegele, Klaudia [3 ]
Cuenod, Aline [4 ]
Mari, Alfredo [4 ]
Seth-Smith, Helena [1 ,2 ,4 ]
Rentsch, Katharina [5 ]
Hinic, Vladimira [1 ,2 ]
Hirsch, Hans H. [3 ,6 ,7 ]
Egli, Adrian [1 ,2 ,4 ]
机构
[1] Univ Hosp Basel, Lab Med, Clin Bacteriol & Mycol, Basel, Switzerland
[2] Univ Basel, Basel, Switzerland
[3] Univ Hosp Basel, Lab Med, Clin Virol, Basel, Switzerland
[4] Univ Basel, Dept Biomed, Lab Med, Appl Microbiol Res, Basel, Switzerland
[5] Univ Hosp Basel, Lab Med, Basel, Switzerland
[6] Univ Hosp Basel, Infect Dis & Hosp Epidemiol, Basel, Switzerland
[7] Univ Basel, Dept Biomed, Transplantat & Clin Virol, Basel, Switzerland
关键词
SARS-CoV-2; COVID-19; GeneXpert; Respiratory infection; Viruses; Diagnostics; PCR; NAT; COBAS; 6800;
D O I
10.1016/j.jviromet.2020.113925
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The clinical and epidemiologic management of the SARS-CoV-2 pandemic is critically dependent on molecular assays with short turn-around time. We validated the novel Xpert Xpress SARS-CoV-2 assay using a commercial nucleic acid testing (Roche Cobas 6800). We found an excellent concordance over a range of SARS-CoV-2 loads and across established human coronaviruses.
引用
下载
收藏
页数:3
相关论文
共 50 条
  • [11] Evaluation of the EasyNAT SARS-CoV-2 assay PCR test for the diagnosis of SARS-CoV-2 infection
    Fernandez-Sanchez, Fernando
    Martin-Bautista, Elena
    Rivas-Ruiz, Francisco
    Wu, Winnie
    Garcia-Aranda, Marilina
    JOURNAL OF VIROLOGICAL METHODS, 2024, 326
  • [12] Deciphering a Case of SARS-CoV-2 E Gene Dropout With the Xpert Xpress Assay
    Park, Kuenyoul
    Sung, Heungsup
    Kim, Mi-Na
    ANNALS OF LABORATORY MEDICINE, 2023, 43 (04) : 392 - 394
  • [13] Extraction-Free Methods for the Detection of SARS-CoV-2 by Reverse Transcription-PCR: a Comparison with the Cepheid Xpert Xpress SARS-CoV-2 Assay across Two Medical Centers
    Cameron, Andrew
    Pecora, Nicole D.
    Pettengill, Matthew A.
    JOURNAL OF CLINICAL MICROBIOLOGY, 2021, 59 (02)
  • [14] Validation of GeneXpert testing for SARS-CoV-2 RNA in eight hospital laboratories in Oman
    Al-Kindi, Nawal
    Al-Shukri, Intisar
    Al-Rashdi, Azza
    Al-Siyabi, Nada
    Al Mahruqi, Samira
    Al-Kindi, Hanan
    Al-Jardani, Amina
    PAN AFRICAN MEDICAL JOURNAL, 2021, 40
  • [15] Rapid identification of SARS-CoV-2 variants: Validation of the simplexa SARS-CoV-2 variant direct assay
    Eptaminitaki, Giasemi C.
    Parakatselaki, Maria-Eleni
    Petroulaki, Chara
    Marinopoulou, Dimitra
    Pitsikaki, Anthi
    Tseliou, Melpomeni
    Zafiropoulos, Alexandros
    Sourvinos, George
    JOURNAL OF VIROLOGICAL METHODS, 2023, 319
  • [16] Prevalence of a Single-Nucleotide Variant of SARS-CoV-2 in Korea and Its Impact on the Diagnostic Sensitivity of the Xpert Xpress SARS-CoV-2 Assay
    Hong, Ki Ho
    In, Ji Won
    Lee, Jaehyeon
    Kim, So Yeon
    Lee, Kyoung Ah
    Kim, Seunghyun
    An, Yeoungim
    Lee, Donggeun
    Sung, Heungsup
    Kim, Jae-Seok
    Lee, Hyukmin
    ANNALS OF LABORATORY MEDICINE, 2022, 42 (01) : 96 - +
  • [17] Validation of a molecular assay to detect SARS-CoV-2 in saliva
    Pitman, Janet L.
    Morris, Arthur J.
    Grice, Stephen
    Walsh, Jay
    Wang, Leyi
    Burke, Martin
    Dixon-McIver, Amanda
    NEW ZEALAND MEDICAL JOURNAL, 2021, 134 (1547)
  • [18] Establishment and validation of a pseudovirus neutralization assay for SARS-CoV-2
    Nie, Jianhui
    Li, Qianqian
    Wu, Jiajing
    Zhao, Chenyan
    Hao, Huan
    Liu, Huan
    Zhang, Li
    Nie, Lingling
    Qin, Haiyang
    Wang, Meng
    Lu, Qiong
    Li, Xiaoyu
    Sun, Qiyu
    Liu, Junkai
    Fan, Changfa
    Huang, Weijin
    Xu, Miao
    Wang, Youchun
    EMERGING MICROBES & INFECTIONS, 2020, 9 (01) : 680 - 686
  • [19] Validation of a chemiluminescent assay for specific SARS-CoV-2 antibody
    Tre-Hardy, Marie
    Wilmet, Alain
    Beukinga, Ingrid
    Dogne, Jean-michel
    Douxfils, Jonathan
    Blairon, Laurent
    CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 2020, 58 (08) : 1357 - 1364
  • [20] Comparison of Xpert Xpress SARS-CoV-2 Assay Compared with Standard M nCoV Real-Time PCR: Prospective Study
    Oh, Ae-chin
    Suh, Hyeon Jeong
    Kim, Heyjin
    Lee, Jin Kyung
    Hong, Young Jun
    CLINICAL LABORATORY, 2024, 70 (02) : 405 - 409