Brief validation of the novel GeneXpert Xpress SARS-CoV-2 PCR assay

被引:34
|
作者
Goldenberger, Daniel [1 ,2 ]
Leuzinger, Karoline [3 ]
Sogaard, Kirstine K. [1 ,2 ,4 ]
Gosert, Rainer [3 ]
Roloff, Tim [1 ,2 ,4 ]
Naegele, Klaudia [3 ]
Cuenod, Aline [4 ]
Mari, Alfredo [4 ]
Seth-Smith, Helena [1 ,2 ,4 ]
Rentsch, Katharina [5 ]
Hinic, Vladimira [1 ,2 ]
Hirsch, Hans H. [3 ,6 ,7 ]
Egli, Adrian [1 ,2 ,4 ]
机构
[1] Univ Hosp Basel, Lab Med, Clin Bacteriol & Mycol, Basel, Switzerland
[2] Univ Basel, Basel, Switzerland
[3] Univ Hosp Basel, Lab Med, Clin Virol, Basel, Switzerland
[4] Univ Basel, Dept Biomed, Lab Med, Appl Microbiol Res, Basel, Switzerland
[5] Univ Hosp Basel, Lab Med, Basel, Switzerland
[6] Univ Hosp Basel, Infect Dis & Hosp Epidemiol, Basel, Switzerland
[7] Univ Basel, Dept Biomed, Transplantat & Clin Virol, Basel, Switzerland
关键词
SARS-CoV-2; COVID-19; GeneXpert; Respiratory infection; Viruses; Diagnostics; PCR; NAT; COBAS; 6800;
D O I
10.1016/j.jviromet.2020.113925
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The clinical and epidemiologic management of the SARS-CoV-2 pandemic is critically dependent on molecular assays with short turn-around time. We validated the novel Xpert Xpress SARS-CoV-2 assay using a commercial nucleic acid testing (Roche Cobas 6800). We found an excellent concordance over a range of SARS-CoV-2 loads and across established human coronaviruses.
引用
收藏
页数:3
相关论文
共 50 条
  • [1] Validation of the GeneXpert Xpress SARS-CoV-2 PCR assay using saliva as biological specimen
    Vaz, Sara Nunes
    de Santana, Daniele Souza
    Martins Netto, Eduardo
    Wang, Wei-Kung
    Brites, Carlos
    [J]. BRAZILIAN JOURNAL OF INFECTIOUS DISEASES, 2021, 25 (02):
  • [2] Validation of specimen pooling using the Cepheid Xpert Xpress SARS-CoV-2 assay
    Balgahom, Rifky
    Ahuja, Vishal
    Pitman, Catherine
    Polkinghorne, Adam
    Branley, James
    [J]. PATHOLOGY, 2022, 54 (03) : 357 - 358
  • [3] SARS-CoV-2 N-gene mutation leading to Xpert Xpress SARS-CoV-2 assay instability
    Foster, Charles S. P.
    Madden, Mathew
    Chan, Raymond
    Agapiou, David
    Baull, Rowena A.
    Rawlinson, William D.
    Van Hal, Sebastiaan J.
    [J]. PATHOLOGY, 2022, 54 (04) : 499 - 501
  • [4] Sample pooling on the Cepheid Xpert® Xpress SARS-CoV-2 assay
    Graham, Maryza
    Williams, Eloise
    Isles, Nicole
    Buadromo, Eka
    Toatu, Tebuka
    Druce, Julian
    Catton, Mike
    Lin, Chantel
    Howden, Benjamin P.
    Williamson, Deborah A.
    [J]. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2021, 99 (02)
  • [5] Clinical evaluation of the GeneXpert® Xpert® Xpress SARS-CoV-2/Flu/RSV combination test
    Johnson, Grant
    Zubrzycki, Arek
    Henry, Michele
    Ranadheera, Charlene
    Corbett, Cindi
    Meyers, Adrienne F. A.
    Sandstrom, Paul A.
    Becker, Michael G.
    [J]. JOURNAL OF CLINICAL VIROLOGY PLUS, 2021, 1 (1-2):
  • [6] Recommendations for sample pooling on the Cepheid GeneXpert(R) system using the Cepheid Xpert(R) Xpress SARS-CoV-2 assay
    Becker, Michael G.
    Taylor, Tracy
    Kiazyk, Sandra
    Cabiles, Dana R.
    Meyers, Adrienne F. A.
    Sandstrom, Paul A.
    [J]. PLOS ONE, 2020, 15 (11):
  • [7] Clinical evaluation of the GeneXpert® Xpert® Xpress SARS-CoV-2/Flu/RSV PLUS combination test
    Johnson, Grant
    Gregorchuk, Branden S. J.
    Zubrzycki, Arek
    Kolsun, Kurt
    Meyers, Adrienne F. A.
    Sandstrom, Paul A.
    Becker, Michael G.
    [J]. CANADIAN JOURNAL OF MICROBIOLOGY, 2023, : 146 - 150
  • [8] Multicenter Evaluation of the Cepheid Xpert Xpress SARS-CoV-2 Assay for the Detection of SARS-CoV-2 in Oropharyngeal Swab Specimens
    Hou, Hongyan
    Chen, Jun
    Wang, Yueqin
    Lu, Yanjun
    Zhu, Yaowu
    Zhang, Bo
    Wang, Feng
    Mao, Lie
    Tang, Yi-Wei
    Hu, Bicheng
    Ren, Yi
    Sun, Ziyong
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2020, 58 (08)
  • [9] Evaluation of the automated cartridge-based ARIES SARS-CoV-2 Assay (RUO) against automated Cepheid Xpert Xpress SARS-CoV-2 PCR as gold standard
    Tanida, Konstantin
    Koste, Lars
    Koenig, Christian
    Wenzel, Werner
    Fritsch, Andreas
    Frickmann, Hagen
    [J]. EUROPEAN JOURNAL OF MICROBIOLOGY AND IMMUNOLOGY, 2020, 10 (03): : 156 - 164
  • [10] Detection of SARS-CoV-2 by Use of the Cepheid Xpert Xpress SARS-CoV-2 and Roche cobas SARS-CoV-2 Assays
    Moran, Angelica
    Beavis, Kathleen G.
    Matushek, Scott M.
    Ciaglia, Carol
    Francois, Nina
    Tesic, Vera
    Love, Nedra
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2020, 58 (08)