Isolation and characterization of twenty-four polymorphic microsatellite loci for the topical seagrass, Thalassia hemprichii

被引：7
|
作者：
Wainwright, Benjamin J. [1 ]
Arlyza, Irma S. [2 ]
Karl, Stephen A. [1 ]
机构：
[1] Univ Hawaii Manoa, Hawaii Inst Marine Biol, Kaneohe, HI 96744 USA
[2] Indonesian Inst Sci, Res Ctr Oceanog, Jakarta 14430, Indonesia
来源：
CONSERVATION GENETICS RESOURCES | 2013年 / 5卷 / 04期
关键词：
Connectivity; Gene flow; Indonesia; Conservation; ABUNDANCE; PRIMERS;
D O I：
10.1007/s12686-013-9937-1
中图分类号：
X176 [生物多样性保护];
学科分类号：
090705 ;
摘要：
Twenty-four polymorphic microsatellite loci were developed for the tropical seagrass, Thalassia hemprichii. Microsatellite enriched genomic libraries were constructed and subsequently sequenced using Pacific Biosciences SMRT technology. The 24 loci were characterized in 19 individuals from the Tukang Besi Islands, South East Sulawesi, Indonesia. Observed levels of heterozygosity ranged from 0.26 to 0.95 with a mean of 4.7 alleles per locus. No pairs of loci showed evidence of significant linkage disequilibrium and one locus significantly deviated from Hardy-Weinberg expectations.
引用
收藏
页码：939 / 941
页数：3
相关论文
共 50 条
  • [11] Isolation and characterization of twenty-three polymorphic microsatellite loci in Schizothorax macropogon
    Guo, Xiang-Zhao
    Zhang, Gui-Rong
    Yan, Ruo-Jin
    Ji, Wei
    Yang, Rui-Bin
    Wei, Kai-Jian
    Wang, Deng-Qiang
    CONSERVATION GENETICS RESOURCES, 2014, 6 (02) : 483 - 485
  • [12] Isolation and characterization of twenty-three polymorphic microsatellite loci for Linckia laevigata
    Wainwright, Benjamin J.
    Arlyza, Irma S.
    Karl, Stephen A.
    CONSERVATION GENETICS RESOURCES, 2013, 5 (01) : 157 - 159
  • [13] Isolation and characterization of twenty-three polymorphic microsatellite loci in Schizothorax macropogon
    Xiang-Zhao Guo
    Gui-Rong Zhang
    Ruo-Jin Yan
    Wei Ji
    Rui-Bin Yang
    Kai-Jian Wei
    Deng-Qiang Wang
    Conservation Genetics Resources, 2014, 6 : 483 - 485
  • [14] Isolation and characterization of twenty-three polymorphic microsatellite loci for Linckia laevigata
    Benjamin J. Wainwright
    Irma S. Arlyza
    Stephen A. Karl
    Conservation Genetics Resources, 2013, 5 : 157 - 159
  • [15] Twenty-four polymorphic microsatellite markers from spotted barbell (Hemibarbus maculates)
    Zhu, Jun-Jie
    Liu, Shi-Li
    Ma, Ke-Yi
    Li, Jia-Le
    Lian, Qing-Ping
    CONSERVATION GENETICS RESOURCES, 2011, 3 (02) : 239 - 241
  • [16] Twenty-four polymorphic microsatellite markers from spotted barbell (Hemibarbus maculates)
    Jun-Jie Zhu
    Shi-Li Liu
    Ke-Yi Ma
    Jia-Le Li
    Qing-Ping Lian
    Conservation Genetics Resources, 2011, 3 : 239 - 241
  • [17] Isolation and Identification of Endophytic Bacteria from Seagrass Thalassia hemprichii as Antibacterial Producer
    Ginting, E. L.
    Maarisit, I.
    Kemer, K.
    Siby, M. S.
    Tilaar, S. O.
    Moko, E. M.
    Tumbol, R. A.
    APPLIED BIOCHEMISTRY AND MICROBIOLOGY, 2023, 59 (05) : 673 - 678
  • [18] Isolation and Identification of Endophytic Bacteria from Seagrass Thalassia hemprichii as Antibacterial Producer
    E. L. Ginting
    I. Maarisit
    K. Kemer
    M. S. Siby
    S. O. Tilaar
    E. M. Moko
    R. A. Tumbol
    Applied Biochemistry and Microbiology, 2023, 59 : 673 - 678
  • [19] Isolation and characterization of twenty-one polymorphic microsatellite loci in the Tibetan macaque (Macaca thibetana)
    X. D. Jia
    B. D. Yang
    B. S. Yue
    H. L. Yin
    H. X. Wang
    X. Y. Zhang
    Russian Journal of Genetics, 2011, 47 : 884 - 887
  • [20] Isolation and characterization of twenty-one polymorphic microsatellite loci in the Tibetan macaque (Macaca thibetana)
    Jia, X. D.
    Yang, B. D.
    Yue, B. S.
    Yin, H. L.
    Wang, H. X.
    Zhang, X. Y.
    RUSSIAN JOURNAL OF GENETICS, 2011, 47 (07) : 884 - 887
12345