Shewanella inventionis sp nov., isolated from deep-sea sediment

被引:16
|
作者
Wang, Ming-qing [1 ,2 ]
Sun, Li [1 ,2 ]
机构
[1] Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao, Peoples R China
[2] Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
关键词
ACID; AMPLIFICATION; DIVERSITY; PRIMERS; WATER;
D O I
10.1099/ijsem.0.001450
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-stain-negative, rod-shaped bacterial strain, designated KX27(T), was isolated from deep-sea sediment of the Okinawa Trough and characterized on the basis of a polyphasic taxonomic approach. The phenotypic features of strain KX27(T) were similar to those of members of the genus Shewanella. Strain KX27(T) exhibited highest 16S rRNA gene sequence similarity (98.37%) to Shewanefla basaltis JCM 14937(T). Levels of gyrB gene sequence similarity between strain KX27(T) and its closest genetic neighbours were lower than 90%, the species cut-off value for Shewanefla. The DNA DNA hybridization value between strain KX27(T) and S. basaltis JCM 14937(T) (54%) was lower than the accepted species threshold. The predominant cellular fatty acids of strain KX27(T) were summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c), C-17:1 omega 8c, summed feature 8 (C-18:1 omega 7c and/or C-18:1 omega 6C) and iso-C-15:0. The major polar lipids of strain KX27(T) were phosphatidylethanolamine and phosphatidylglycerol. On the basis of combined phenotypic, chemotaxonomic and phylogenetic analysis, strain KX27(T) represents a novel species of the genus Shewanella, for which the name Shewanefla inventionis sp. nov. is proposed. The type strain is KX27(T) (=KCTC 42807(T)=CGMCC 1.15339(T)).
引用
收藏
页码:4947 / 4953
页数:7
相关论文
共 50 条
  • [21] Aurantimonas marina sp. nov., isolated from deep-sea sediment
    Song, Lei
    Liu, Hongcan
    Sun, Qinglei
    Dong, Xiuzhu
    Zhou, Yuguang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (08)
  • [22] Pedobacter indicus sp. nov., isolated from deep-sea sediment
    He, Xiao-yan
    Li, Na
    Chen, Xiu-lan
    Zhang, Yu-zhong
    Zhang, Xi-ying
    Song, Xiao-yan
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2020, 113 (03): : 357 - 364
  • [23] Streptomyces indicus sp nov., an actinomycete isolated from deep-sea sediment
    Luo, Yingxue
    Xiao, Jing
    Wang, Yin
    Xu, Jing
    Xie, Shujie
    Xu, Jun
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 2712 - 2716
  • [24] Citreicella marina sp. nov., isolated from deep-sea sediment
    Lai, Qiliang
    Fu, Yuanyuan
    Wang, Jianning
    Chen, Shuangxi
    Zhong, Huanzi
    Sun, Fengqin
    Shao, Zongze
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 728 - 731
  • [25] Pedobacter indicus sp. nov., isolated from deep-sea sediment
    Xiao-yan He
    Na Li
    Xiu-lan Chen
    Yu-zhong Zhang
    Xi-ying Zhang
    Xiao-yan Song
    [J]. Antonie van Leeuwenhoek, 2020, 113 : 357 - 364
  • [26] Alteromonas oceanisediminis sp. nov., isolated from deep-sea sediment
    Zhang, Xiao-Yu
    Wang, Zhen
    Cheng, Jun-Hui
    Fu, Hui-Hui
    Zhang, Yu-Zhong
    Chen, Xiu-Lan
    Zhang, Xi-Ying
    Song, Xiao-Yan
    Zhang, Yu-Qiang
    Xu, Fei
    [J]. ARCHIVES OF MICROBIOLOGY, 2022, 204 (06)
  • [27] Alteromonas oceanisediminis sp. nov., isolated from deep-sea sediment
    Xiao-Yu Zhang
    Zhen Wang
    Jun-Hui Cheng
    Hui-Hui Fu
    Yu-Zhong Zhang
    Xiu-Lan Chen
    Xi-Ying Zhang
    Xiao-Yan Song
    Yu-Qiang Zhang
    Fei Xu
    [J]. Archives of Microbiology, 2022, 204
  • [28] Shewanella indica sp nov., isolated from sediment of the Arabian Sea
    Verma, Pankaj
    Pandey, Prashant Kumar
    Gupta, Arvind Kumar
    Kim, Ho Jun
    Baik, Keun Sik
    Seong, Chi Nam
    Patole, Milind Shivaji
    Shouche, Yogesh Shreepad
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 2058 - 2064
  • [29] Oceanobacillus profundus sp nov., isolated from a deep-sea sediment core
    Kim, Yoon-Gon
    Choi, Dong Han
    Hyun, Sangmin
    Cho, Byl Cheol
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 409 - 413
  • [30] Description of Algoriphagus iocasae sp nov., isolated from deep-sea sediment
    Sun, Qing-lei
    Sun, Li
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (02) : 243 - 249