Biomarker discovery in human cerebrospinal fluid: the need for integrative metabolome and proteome databases

被引:4
|
作者
Schwarz, Emanuel [1 ]
Torrey, E. Fuller [2 ]
Guest, Paul C. [1 ]
Bahn, Sabine [1 ,3 ]
机构
[1] Univ Cambridge, Inst Biotechnol, Cambridge CB2 1QT, England
[2] Stanley Med Res Inst, Chevy Chase, MD 20815 USA
[3] Erasmus Univ, Med Ctr, Dept Neurosci, NL-3000 CA Rotterdam, Netherlands
来源
GENOME MEDICINE | 2012年 / 4卷
关键词
Schizophrenia; Amyotrophic Lateral Sclerosis; Genome Medicine; Single Platform; Multiplex Immunoassay;
D O I
10.1186/gm338
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The number of metabolites identified in human cerebrospinal fluid (CSF) has steadily increased over the past 5 years, and in this issue of Genome Medicine David Wishart and colleagues provide a comprehensive update that brings the number of metabolites listed in the CSF metabolome database to 476 compounds. There is now a need for an integrative metabolome-proteome CSF database to maximize the impact of this achievement in biomedical research. Only by such efforts can we hope to unravel the complexity of molecular pathophysiological processes.
引用
收藏
页数:3
相关论文
共 50 条
  • [31] A chronic fatigue syndrome - related proteome in human cerebrospinal fluid
    Baraniuk, JN
    Casado, B
    Maibach, H
    Clauw, DJ
    Pannell, LK
    Hess, S
    BMC NEUROLOGY, 2005, 5 (1)
  • [32] A chronic fatigue syndrome – related proteome in human cerebrospinal fluid
    James N Baraniuk
    Begona Casado
    Hilda Maibach
    Daniel J Clauw
    Lewis K Pannell
    Sonja Hess S
    BMC Neurology, 5
  • [33] Proteomics of human cerebrospinal fluid: Discovery and verification of biomarker candidates in neurodegenerative diseases using quantitative proteomics
    Kroksveen, A. C.
    Opsahl, J. A.
    Aye, T. T.
    Ulvik, R. J.
    Berven, F. S.
    JOURNAL OF PROTEOMICS, 2011, 74 (04) : 371 - 388
  • [34] Amniotic Fluid Proteome Analysis from Down Syndrome Pregnancies for Biomarker Discovery
    Cho, Chan-Kyung J.
    Smith, Christopher R.
    Diamandis, Eleftherios P.
    JOURNAL OF PROTEOME RESEARCH, 2010, 9 (07) : 3574 - 3582
  • [35] Continual cerebrospinal fluid sampling in the neonatal domestic piglet for biomarker and discovery studies
    Pino, Megan G.
    Ganguly, Ranjit
    Rich, Kelly A.
    Fox, Ashley
    Mattox, Lori
    Keckley, Elizabeth
    Joseph, Matthew
    Malbrue, Raphael
    Youngblood, Brad
    Krishna, Vibhor
    Kolb, Stephen J.
    JOURNAL OF NEUROSCIENCE METHODS, 2022, 366
  • [36] Proteomic-based biomarker discovery with emphasis on cerebrospinal fluid and multiple sclerosis
    Berven, F. S.
    Flikka, K.
    Berle, M.
    Vedeler, C.
    Ulvik, R. J.
    CURRENT PHARMACEUTICAL BIOTECHNOLOGY, 2006, 7 (03) : 147 - 158
  • [37] Proteomic Biomarker Discovery in Cerebrospinal Fluid for Cerebral Vasospasm Following Subarachnoid Hemorrhage
    Lad, Shivanand P.
    Hegen, Harald
    Gupta, Gaurav
    Deisenhammer, Florian
    Steinberg, Gary K.
    JOURNAL OF STROKE & CEREBROVASCULAR DISEASES, 2012, 21 (01): : 30 - 41
  • [38] Data for a comprehensive map and functional annotation of the human cerebrospinal fluid proteome
    Zhang, Yang
    Guo, Zhengguang
    Zou, Lili
    Yang, Yehong
    Zhang, Liwei
    Ji, Nan
    Shao, Chen
    Wang, Yajie
    Sun, Wei
    DATA IN BRIEF, 2015, 3 : 103 - 107
  • [39] Mining the human cerebrospinal fluid proteome by immunodepletion and shotgun mass spectrometry
    Maccarrone, G
    Milfay, D
    Birg, I
    Rosenhagen, M
    Holsboer, F
    Grimm, R
    Bailey, J
    Zolotarjova, N
    Turck, CW
    ELECTROPHORESIS, 2004, 25 (14) : 2402 - 2412
  • [40] A comprehensive map and functional annotation of the normal human cerebrospinal fluid proteome
    Zhang, Yang
    Guo, Zhengguang
    Zou, Lili
    Yang, Yehong
    Zhang, Liwei
    Ji, Nan
    Shao, Chen
    Sun, Wei
    Wang, Yajie
    JOURNAL OF PROTEOMICS, 2015, 119 : 90 - 99