Biomarker discovery in human cerebrospinal fluid: the need for integrative metabolome and proteome databases

被引:4
|
作者
Schwarz, Emanuel [1 ]
Torrey, E. Fuller [2 ]
Guest, Paul C. [1 ]
Bahn, Sabine [1 ,3 ]
机构
[1] Univ Cambridge, Inst Biotechnol, Cambridge CB2 1QT, England
[2] Stanley Med Res Inst, Chevy Chase, MD 20815 USA
[3] Erasmus Univ, Med Ctr, Dept Neurosci, NL-3000 CA Rotterdam, Netherlands
来源
GENOME MEDICINE | 2012年 / 4卷
关键词
Schizophrenia; Amyotrophic Lateral Sclerosis; Genome Medicine; Single Platform; Multiplex Immunoassay;
D O I
10.1186/gm338
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The number of metabolites identified in human cerebrospinal fluid (CSF) has steadily increased over the past 5 years, and in this issue of Genome Medicine David Wishart and colleagues provide a comprehensive update that brings the number of metabolites listed in the CSF metabolome database to 476 compounds. There is now a need for an integrative metabolome-proteome CSF database to maximize the impact of this achievement in biomedical research. Only by such efforts can we hope to unravel the complexity of molecular pathophysiological processes.
引用
收藏
页数:3
相关论文
共 50 条
  • [21] Mining the Human Proteome Biomarker Discovery for Human Cancer and Metastases
    Yang, Jiang
    Roy, Roopali
    Jedinak, Andrej
    Moses, Marsha A.
    CANCER JOURNAL, 2015, 21 (04): : 327 - 336
  • [22] Human saliva proteome analysis and disease biomarker discovery
    Hu, Shen
    Loo, Joseph A.
    Wong, Dovid T.
    EXPERT REVIEW OF PROTEOMICS, 2007, 4 (04) : 531 - 538
  • [23] Cerebrospinal Fluid Protein Biomarker Discovery in CLN3
    Do, An N. Dang N.
    Sleat, David E. E.
    Campbell, Kiersten
    Johnson, Nicholas L. L.
    Zheng, Haiyan
    Wassif, Christopher A. A.
    Dale, Ryan K. K.
    Porter, Forbes D. D.
    JOURNAL OF PROTEOME RESEARCH, 2023, 22 (07) : 2493 - 2508
  • [24] Proteome profiling of cerebrospinal fluid reveals biomarker candidates for Parkinson's disease
    Karayel, Ozge
    Winter, Sebastian Virreira
    Padmanabhan, Shalini
    Kuras, Yuliya, I
    Vu, Duc Tung
    Tuncali, Idil
    Merchant, Kalpana
    Wills, Anne-Marie
    Scherzer, Clemens R.
    Mann, Matthias
    CELL REPORTS MEDICINE, 2022, 3 (06)
  • [25] Human kidney glomerulus proteome and biomarker discovery of kidney diseases
    Yoshida, Yutaka
    Miyamoto, Masahito
    Taguchi, Izumi
    Xu, Bo
    Zhang, Ying
    Yaoita, Eishin
    Fujinaka, Hidehiko
    Yamamoto, Tadashi
    PROTEOMICS CLINICAL APPLICATIONS, 2008, 2 (03) : 420 - 427
  • [26] Deciphering Protein Secretion from the Brain to Cerebrospinal Fluid for Biomarker Discovery
    Waury, Katharina
    de Wit, Renske
    Verberk, Inge M. W.
    Teunissen, Charlotte E.
    Abeln, Sanne
    JOURNAL OF PROTEOME RESEARCH, 2023, 22 (09) : 3068 - 3080
  • [27] Approach to Cerebrospinal Fluid (CSF) Biomarker Discovery and Evaluation in HIV Infection
    Price, Richard W.
    Peterson, Julia
    Fuchs, Dietmar
    Angel, Thomas E.
    Zetterberg, Henrik
    Hagberg, Lars
    Spudich, Serena
    Smith, Richard D.
    Jacobs, Jon M.
    Brown, Joseph N.
    Gisslen, Magnus
    JOURNAL OF NEUROIMMUNE PHARMACOLOGY, 2013, 8 (05) : 1147 - 1158
  • [28] Alzheimer's disease cerebrospinal fluid biomarker discovery: A proteomics approach
    D'Ascenzo, M
    Relkin, NR
    Lee, KH
    CURRENT OPINION IN MOLECULAR THERAPEUTICS, 2005, 7 (06) : 557 - 564
  • [29] Approach to Cerebrospinal Fluid (CSF) Biomarker Discovery and Evaluation in HIV Infection
    Richard W. Price
    Julia Peterson
    Dietmar Fuchs
    Thomas E. Angel
    Henrik Zetterberg
    Lars Hagberg
    Serena Spudich
    Richard D. Smith
    Jon M. Jacobs
    Joseph N. Brown
    Magnus Gisslen
    Journal of Neuroimmune Pharmacology, 2013, 8 : 1147 - 1158
  • [30] Between-gel reproducibility of the human cerebrospinal fluid proteome
    Terry, DE
    Desiderio, DM
    PROTEOMICS, 2003, 3 (10) : 1962 - 1979