Fast, Approximate Maximum Likelihood Estimation of Log-Gaussian Cox Processes

被引:3
|
作者
Dovers, Elliot [1 ,2 ]
Brooks, Wesley
Popovic, Gordana C. C.
Warton, David I. I.
机构
[1] Univ New South Wales, Sch Math & Stat & Evolut, Sydney, Australia
[2] Univ New South Wales, Evolut & Ecol Res Ctr, Sydney, Australia
基金
澳大利亚研究理事会;
关键词
Automatic differentiation; Fixed rank kriging; Integrated nested Laplace approximation; Point patterns; Spatial point process; Variational approximation; PRESENCE-ONLY DATA; BAYESIAN-INFERENCE; PROCESS MODELS; LAPLACE APPROXIMATION; R PACKAGE; SPACE; BIAS;
D O I
10.1080/10618600.2023.2182311
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
Log-Gaussian Cox processes (LGCPs) offer a framework for regression-style modeling of point patterns that can accommodate spatial latent effects. These latent effects can be used to account for missing predictors or other sources of clustering that could not be explained by a Poisson process. Fitting LGCP models can be challenging because the marginal likelihood does not have a closed form and it involves a high dimensional integral to account for the latent Gaussian field. We propose a novel methodology for fitting LGCP models that addresses these challenges using a combination of variational approximation and reduced rank interpolation. Additionally, we implement automatic differentiation to obtain exact gradient information, for computationally efficient optimization and to consider integral approximation using the Laplace method. We demonstrate the method's performance through both simulations and a real data application, with promising results in terms of computational speed and accuracy compared to that of existing approaches. for this article is available online.
引用
收藏
页码:1660 / 1670
页数:11
相关论文
共 50 条
  • [31] A spatially discrete approximation to log-Gaussian Cox processes for modelling aggregated disease count data
    Johnson, Olatunji
    Diggle, Peter
    Giorgi, Emanuele
    STATISTICS IN MEDICINE, 2019, 38 (24) : 4871 - 4887
  • [32] Log Gaussian Cox processes
    Moller, J
    Syversveen, AR
    Waagepetersen, RP
    SCANDINAVIAN JOURNAL OF STATISTICS, 1998, 25 (03) : 451 - 482
  • [33] Variable selection methods for Log-Gaussian Cox processes: A case-study on accident data
    Spychala, Cecile
    Dombry, Clement
    Goga, Camelia
    SPATIAL STATISTICS, 2024, 61
  • [34] A FAST MAXIMUM-LIKELIHOOD-ESTIMATION AND DETECTION ALGORITHM FOR BERNOULLI-GAUSSIAN PROCESSES
    CHI, CY
    IEEE TRANSACTIONS ON ACOUSTICS SPEECH AND SIGNAL PROCESSING, 1987, 35 (11): : 1636 - 1639
  • [35] Penalised maximum likelihood estimation for fractional Gaussian processes
    Lieberman, O
    BIOMETRIKA, 2001, 88 (03) : 888 - 894
  • [36] Regularized estimation for highly multivariate log Gaussian Cox processes
    Choiruddin, Achmad
    Cuevas-Pacheco, Francisco
    Coeurjolly, Jean-Francois
    Waagepetersen, Rasmus
    STATISTICS AND COMPUTING, 2020, 30 (03) : 649 - 662
  • [37] Regularized estimation for highly multivariate log Gaussian Cox processes
    Achmad Choiruddin
    Francisco Cuevas-Pacheco
    Jean-François Coeurjolly
    Rasmus Waagepetersen
    Statistics and Computing, 2020, 30 : 649 - 662
  • [38] Bayesian Inference and Data Augmentation Schemes for Spatial, Spatiotemporal and Multivariate Log-Gaussian Cox Processes in R
    Taylor, Benjamin M.
    Davies, Tilman M.
    Rowlingson, Barry S.
    Diggle, Peter J.
    JOURNAL OF STATISTICAL SOFTWARE, 2015, 63 (07): : 1 - 48
  • [39] Fast Stochastic Quadrature for Approximate Maximum-Likelihood Estimation
    Piatkowski, Nico
    Morik, Katharina
    UNCERTAINTY IN ARTIFICIAL INTELLIGENCE, 2018, : 715 - 724
  • [40] AN APPROXIMATE MAXIMUM-LIKELIHOOD-ESTIMATION FOR NON-GAUSSIAN NONMINIMUM PHASE MOVING AVERAGE PROCESSES
    LII, KS
    ROSENBLATT, M
    JOURNAL OF MULTIVARIATE ANALYSIS, 1992, 43 (02) : 272 - 299