Application of Fragment Molecular Orbital (FMO) Method to Nano-Bio Field

被引:1
|
作者
Nakano, Tatsuya [1 ,2 ]
Mochizuki, Yuji [2 ,3 ]
Amari, Shinji [4 ]
Kobayashi, Masato [5 ]
Fukuzawa, Kaori [2 ,6 ]
Tanaka, Shigenori [2 ,7 ]
机构
[1] Natl Inst Hlth Sci, Div Med Safety Sci, Setagaya Ku, 1-18-1 Kamiyoga, Tokyo 1588501, Japan
[2] Japan Sci & Technol Agcy, CREST Project, Kawaguchi, Saitama 3320012, Japan
[3] Rikkyo Univ, Fac Sci, Dept Chem, Toshima Ku, Tokyo 1718501, Japan
[4] Univ Tokyo, Inst Ind Sci, Meguro Ku, Tokyo 1538505, Japan
[5] Univ Tokyo, Ctr Collaborat Res, AdvanceSoft, Meguro Ku, Tokyo 1538904, Japan
[6] Mizuho Informat & Res Inst Inc, Chiyoda Ku, Tokyo 1018443, Japan
[7] Kobe Univ, Grad Sch Sci & Technol, Nada Ku, Kobe, Hyogo 6578501, Japan
关键词
Fragment molecular orbital method; MP2; CIS(D); CAFI; VISCANA; ABINIT-MP;
D O I
10.2477/jccj.6.173
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Kitaura et al. (Chem. Phys. Lett. 312, 319-324 (1999)) have proposed an ab initio fragment molecular orbital (FMO) method by which large molecules such as proteins can be easily treated with chemical accuracy. In the ab initio FMO method, a molecule or a molecular cluster is divided into fragments, and the MO calculations on the fragments (monomers) and the fragment pairs (dimers) are performed to obtain the total energy that is expressed as a summation of the fragment energies and inter-fragment interaction energies (IFIEs). In this paper, we provide a brief description of the ab initio FMO method and demonstrate recent applications in the nano-bio field.
引用
收藏
页码:173 / 184
页数:12
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