Nm-seq maps 2′-O-methylation sites in human mRNA with base precision

被引：0

作者：

Qing Dai

Sharon Moshitch-Moshkovitz

Dali Han

Nitzan Kol

Ninette Amariglio

Gideon Rechavi

Dan Dominissini

Chuan He

机构：

[1] The University of Chicago,Department of Chemistry

[2] Howard Hughes Medical Institute,Department of Biochemistry and Molecular Biology

[3] The University of Chicago,undefined

[4] Cancer Research Center,undefined

[5] Chaim Sheba Medical Center,undefined

[6] Wohl Centre for Translational Medicine,undefined

[7] Chaim Sheba Medical Center,undefined

[8] The Mina and Everard Goodman Faculty of Life Sciences,undefined

[9] Bar-Ilan University,undefined

[10] Sackler School of Medicine,undefined

[11] Tel Aviv University,undefined

[12] The University of Chicago,undefined

[13] Institute for Biophysical Dynamics,undefined

[14] The University of Chicago,undefined

来源：

Nature Methods | 2017年 / 14卷

关键词：

D O I：

暂无

中图分类号：

学科分类号：

摘要：

Iterative oxidation, elimination and dephosphorylation steps remove nucleotides from the 3′ end of RNA until a 2′-O-methylated ribose that cannot be oxidized is encountered and brings the process to a stop. High-throughput sequencing of these fragments exposes 2′-O-methyl sites at base resolution.

引用

页码：695 / 698

页数：3

共 50 条

[1] Correction: Corrigendum: Nm-seq maps 2′-O-methylation sites in human mRNA with base precision
Qing Dai
Sharon Moshitch-Moshkovitz
Dali Han
Nitzan Kol
Ninette Amariglio
Gideon Rechavi
Dan Dominissini
Chuan He
Nature Methods, 2018, 15 : 226 - 227
[2] Nm-seq maps 2′-O-methylation sites in human mRNA with base precision (vol 14, pg 695, 2017)
Dai, Qing
Moshitch-Moshkovitz, Sharon
Han, Dali
Kol, Nitzan
Amariglio, Ninette
Rechavi, Gideon
Dominissini, Dan
He, Chuan
NATURE METHODS, 2018, 15 (03) : 226 - 227
[3] Nm-seq maps 2′-O-methytation sites in human mRNA with base precision
Dai, Qing
Moshitch-Moshkovitz, Sharon
Han, Dali
Kol, Nitzan
Amariglio, Ninette
Rechavi, Gideon
Dominissini, Dan
He, Chuan
NATURE METHODS, 2017, 14 (07) : 695 - +
[4] 2'-O-methylation '-O-methylation at internal sites on mRNA promotes mRNA stability
Li, Yanqiang
Yi, Yang
Gao, Xinlei
Wang, Xin
Zhao, Dongyu
Wang, Rui
Zhang, Li-Sheng
Gao, Boyang
Zhang, Yadong
Zhang, Lili
Cao, Qi
Chen, Kaifu
MOLECULAR CELL, 2024, 84 (12) : 2320 - 2336.e6
[5] Single base resolution mapping of 2′-O-methylation sites in human mRNA and in 3′ terminal ends of small RNAs
Hsu, Phillip J.
Fei, Qili
Dai, Qing
Shi, Hailing
Dominissini, Dan
Ma, Lijia
He, Chuan
METHODS, 2019, 156 : 85 - 90
[6] RNA 2′-O-Methylation (Nm) Modification in Human Diseases
Dimitrova, Dilyana G.
Teysset, Laure
Carre, Clement
GENES, 2019, 10 (02)
[7] Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2′-O-methylation
Chen, Li
Zhang, Li-Sheng
Ye, Chang
Zhou, Huiqing
Liu, Bei
Gao, Boyang
Deng, Zixin
Zhao, Changming
He, Chuan
Dickinson, Bryan C.
CELL RESEARCH, 2023, 33 (09) : 727 - 730
[8] Nm-Mut-seq: a base-resolution quantitative method for mapping transcriptome-wide 2′-O-methylation
Li Chen
Li-Sheng Zhang
Chang Ye
Huiqing Zhou
Bei Liu
Boyang Gao
Zixin Deng
Changming Zhao
Chuan He
Bryan C. Dickinson
Cell Research, 2023, 33 : 727 - 730
[9] Constitutive and variable 2'-O-methylation (Nm) in human ribosomal RNA
Motorin, Yuri
Quinternet, Marc
Rhalloussi, Wassim
Marchand, Virginie
RNA BIOLOGY, 2021, 18 : 88 - 97
[10] NmSEER: A Prediction Tool for 2′-O-Methylation (Nm) Sites Based on Random Forest
Zhou, Yiran
Cui, Qinghua
Zhou, Yuan
INTELLIGENT COMPUTING THEORIES AND APPLICATION, PT I, 2018, 10954 : 893 - 900

← 1 2 3 4 5 →