Simultaneous phylogeny reconstruction and multiple sequence alignment

被引：0
|
作者：
Feng Yue
Jian Shi
Jijun Tang
机构：
[1] UCSD School of Medicine,Ludwig Institute for Cancer Research
[2] University of South Carolina,Department of Computer Science and Engineering
来源：
BMC Bioinformatics | / 10卷 / Suppl 1期
关键词：
Multiple Sequence Alignment; Internal Node; Input Sequence; Pairwise Alignment; Internal Sequence;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] Simultaneous phylogeny reconstruction and multiple sequence alignment
    Yue, Feng
    Shi, Jian
    Tang, Jijun
    [J]. BMC BIOINFORMATICS, 2009, 10
  • [2] Simultaneous statistical multiple alignment and phylogeny reconstruction
    Fleissner, R
    Metzler, D
    Von Haeseler, A
    [J]. SYSTEMATIC BIOLOGY, 2005, 54 (04) : 548 - 561
  • [3] Multiple Sequence Alignment Averaging Improves Phylogeny Reconstruction
    Ashkenazy, Haim
    Sela, Itamar
    Karin, Eli Levy
    Landan, Giddy
    Pupko, Tal
    [J]. SYSTEMATIC BIOLOGY, 2019, 68 (01) : 117 - 130
  • [4] Large scale multiple sequence alignment with simultaneous phylogeny inference
    Parmentier, Gilles
    Trystram, Denis
    Zola, Jaroslaw
    [J]. JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING, 2006, 66 (12) : 1534 - 1545
  • [5] HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstruction
    Westesson, Oscar
    Barquist, Lars
    Holmes, Ian
    [J]. BIOINFORMATICS, 2012, 28 (08) : 1170 - 1171
  • [6] Parametric multiple sequence alignment and phylogeny construction
    Fernández-Baca, D
    Seppäläinen, T
    Slutzki, G
    [J]. COMBINATORIAL PATTERN MATCHING, 2000, 1848 : 69 - 83
  • [7] Parametric multiple sequence alignment and phylogeny construction
    Fernández-Baca, David
    Seppäläinen, Timo
    Slutzki, Giora
    [J]. Journal of Discrete Algorithms, 2004, 2 (2 SPEC. ISS.) : 271 - 287
  • [8] Multiobjective Formulation of Multiple Sequence Alignment for Phylogeny Inference
    Nayeem, Muhammad Ali
    Bayzid, Md Shamsuzzoha
    Rahman, Atif Hasan
    Shahriyar, Rifat
    Rahman, M. Sohel
    [J]. IEEE TRANSACTIONS ON CYBERNETICS, 2022, 52 (05) : 2775 - 2786
  • [9] Iterative versus simultaneous multiple sequence alignment
    Dress, A
    [J]. COMBINATORIAL PATTERN MATCHING, PROCEEDINGS, 1997, 1264 : 275 - 275
  • [10] Is multiple-sequence alignment required for accurate inference of phylogeny?
    Hohl, Michael
    Ragan, Mark A.
    [J]. SYSTEMATIC BIOLOGY, 2007, 56 (02) : 206 - 221
12345