Bi-objective integer programming for RNA secondary structure prediction with pseudoknots

被引:0
|
作者
Audrey Legendre
Eric Angel
Fariza Tahi
机构
[1] IBISC,
[2] Univ Evry,undefined
[3] Université Paris-Saclay,undefined
来源
关键词
RNA; Secondary structure; Pseudoknot; Integer programming; Bi-objective; Optimal solutions; Sub-optimal solutions;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] A bi-objective integer programming model for partly-restricted flight departure scheduling
    Zhong, Han
    Guan, Wei
    Zhang, Wenyi
    Jiang, Shixiong
    Fan, Lingling
    PLOS ONE, 2018, 13 (05):
  • [32] An efficient simulated annealing algorithm for the RNA secondary structure prediction with Pseudoknots
    Zhang Kai
    Wang Yuting
    Lv Yulin
    Liu Jun
    He Juanjuan
    BMC GENOMICS, 2019, 20 (Suppl 13)
  • [33] An efficient simulated annealing algorithm for the RNA secondary structure prediction with Pseudoknots
    Zhang Kai
    Wang Yuting
    Lv Yulin
    Liu Jun
    He Juanjuan
    BMC Genomics, 20
  • [34] Multistrand RNA Secondary Structure Prediction and Nanostructure Design Including Pseudoknots
    Bindewald, Eckart
    Afonin, Kirill
    Jaeger, Luc
    Shapiro, Bruce A.
    ACS NANO, 2011, 5 (12) : 9542 - 9551
  • [35] Visualization of RNA secondary structure with pseudoknots
    Yang, Lina
    Liu, Yang
    Luo, Huiwu
    Li, Xichun
    Tang, Yuan Yan
    INTERNATIONAL JOURNAL OF WAVELETS MULTIRESOLUTION AND INFORMATION PROCESSING, 2022, 20 (01)
  • [36] ATTfold: RNA Secondary Structure Prediction With Pseudoknots Based on Attention Mechanism
    Wang, Yili
    Liu, Yuanning
    Wang, Shuo
    Liu, Zhen
    Gao, Yubing
    Zhang, Hao
    Dong, Liyan
    FRONTIERS IN GENETICS, 2020, 11
  • [37] RNA PSEUDOKNOTS - STRUCTURE, DETECTION, AND PREDICTION
    PLEIJ, CWA
    BOSCH, L
    METHODS IN ENZYMOLOGY, 1989, 180 : 289 - 303
  • [38] An exact and polynomial approach for a bi-objective integer programming problem regarding network flow routing
    Pinto, Leizer L.
    Fernandes, Katia C. C.
    Cardoso, Kleber V.
    Maculan, Nelson
    COMPUTERS & OPERATIONS RESEARCH, 2019, 106 : 28 - 35
  • [39] The hybrid queuing and bi-objective integer programming model for scheduling frontline employees in a retail organisation
    Melachrinoudis, Emanuel
    Min, Hokey
    INTERNATIONAL JOURNAL OF SERVICES TECHNOLOGY AND MANAGEMENT, 2008, 9 (01) : 33 - 50
  • [40] An improved mixed-integer programming approach for bi-objective parallel machine scheduling and location
    Wu, Peng
    Wang, Yun
    Cheng, Junheng
    Li, Yantong
    COMPUTERS & INDUSTRIAL ENGINEERING, 2022, 174