Development and characterization of 15 microsatellite loci for Cariniana estrellensis and transferability to Cariniana legalis, two endangered tropical tree species

被引：0
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作者：
Marcela Corbo Guidugli
Tatiana de Campos
Adna Cristina Barbosa de Sousa
Juliana Massimino Feres
Alexandre Magno Sebbenn
Moacyr Antonio Mestriner
Eucleia Primo Betioli Contel
Ana Lilia Alzate-Marin
机构：
[1] Universidade de São Paulo (USP),Faculdade de Medicina de Ribeirão Preto, Departamento de Genética, Laboratório de Genética Vegetal
[2] Universidade Estadual de Campinas (Unicamp),Centro de Biologia Molecular e Engenharia Genética, Departamento de Genética e Evolução
[3] Estação Experimental de Tupi,Instituto Florestal de São Paulo
来源：
Conservation Genetics | 2009年 / 10卷
关键词：
Conservation genetics; Forest; Genetic diversity; Jequitibá branco; Molecular marker; SSR;
D O I：
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学科分类号：
摘要：
From a genomic library enriched for GA/CA repeats, 15 highly polymorphic microsatellite markers were developed for Cariniana estrellensis, a tropical forest tree. The microsatellite loci were screened in 49 mature trees found between Pardo river and Mogi-Guaçu river basins, in the state of São Paulo, Brazil. A total of 140 alleles were detected with an average of 9.33 alleles per locus. The expected heterozygosity ranged from 0.37 to 0.88. These loci showed a high probability of paternity exclusion. Additionally, 12 loci were effectively transferred to Cariniana legalis. High levels of polymorphism make the present SSR markers useful for population genetic studies.
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  • [1] Development and characterization of 15 microsatellite loci for Cariniana estrellensis and transferability to Cariniana legalis, two endangered tropical tree species
    Guidugli, Marcela Corbo
    de Campos, Tatiana
    Barbosa de Sousa, Adna Cristina
    Feres, Juliana Massimino
    Sebbenn, Alexandre Magno
    Mestriner, Moacyr Antonio
    Betioli Contel, Eucleia Primo
    Alzate-Marin, Ana Lilia
    [J]. CONSERVATION GENETICS, 2009, 10 (04) : 1001 - 1004
  • [2] MICROSATELLITE MARKERS FOR CARINIANA LEGALIS (LECYTHIDACEAE) AND THEIR TRANSFERABILITY TO C. ESTRELLENSIS
    Tambarussi, Evandro Vagner
    Sebbenn, Alexandre Magno
    Moreno, Maria Andreia
    Ferraz, Elza Martins
    Kageyama, Paulo Yoshio
    Vencovsky, Roland
    [J]. APPLICATIONS IN PLANT SCIENCES, 2013, 1 (06):
  • [3] Genetic characterization of 12 heterologous microsatellite markers for the giant tropical tree Cariniana legalis (Lecythidaceae)
    Guidugli, Marcela Corbo
    Guerrieri Accoroni, Klaus Alvaro
    Mestriner, Moacyr Antonio
    Betioli Contel, Eucleia Primo
    Martinez, Carlos Alberto
    Alzate-Marin, Ana Lilia
    [J]. GENETICS AND MOLECULAR BIOLOGY, 2010, 33 (01) : 131 - 134
  • [4] Development and characterization of microsatellite loci for Cedrela fissilis Vell (Meliaceae), an endangered tropical tree species
    Gandara, F. B.
    Tambarussi, E. V.
    Sebbenn, A. M.
    Ferraz, E. M.
    Moreno, M. A.
    Ciampi, A. Y.
    Vianello, R. P.
    Grattapaglia, D.
    Kageyama, P. Y.
    [J]. SILVAE GENETICA, 2014, 63 (05) : 240 - 243
  • [5] Characterization of 15 polymorphic microsatellite loci in an endangered tropical tree Hopea bilitonensis (Dipterocarpaceae) in Peninsular Malaysia
    Lee, SL
    Tani, N
    Ng, KKS
    Tsumura, Y
    [J]. MOLECULAR ECOLOGY NOTES, 2004, 4 (02): : 147 - 149
  • [6] Isolation and characterization of microsatellite loci for Hymenaea courbaril and transferability to Hymenaea stigonocarpa, two tropical timber species
    Ciampi, A. Y.
    Azevedo, V. C. R.
    Gaiotto, F. A.
    Ramos, A. C.
    Lovato, M. B.
    [J]. MOLECULAR ECOLOGY RESOURCES, 2008, 8 (05) : 1074 - 1077
  • [7] Storage time affects the germination and proteomic profile of seeds of Cariniana legalis (Mart.) O. Kuntze (Lecythidaceae), an endangered tree species native to the Brazilian Atlantic Forest
    Mesquita Aragao, Victor Paulo
    Campos Trindade, Bianca Machado
    Reis, Ricardo Souza
    Silveira, Vanildo
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    [J]. BRAZILIAN JOURNAL OF BOTANY, 2019, 42 (03) : 407 - 419
  • [8] Storage time affects the germination and proteomic profile of seeds of Cariniana legalis (Mart.) O. Kuntze (Lecythidaceae), an endangered tree species native to the Brazilian Atlantic Forest
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    Bianca Machado Campos Trindade
    Ricardo Souza Reis
    Vanildo Silveira
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    [J]. Brazilian Journal of Botany, 2019, 42 : 407 - 419
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    Sodre, Davidson
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    Schneider, Horacio
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    Sequeira, Fernando
    Vallinoto, Marcelo
    [J]. CONSERVATION GENETICS RESOURCES, 2015, 7 (01) : 247 - 250
  • [10] Development and characterization of microsatellite loci for Rhinella marina (Amphibia, Bufonidae) and their transferability to two closely related species
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    Davidson Sodré
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    [J]. Conservation Genetics Resources, 2015, 7 : 247 - 250
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