Development and characterization of 15 microsatellite loci for Cariniana estrellensis and transferability to Cariniana legalis, two endangered tropical tree species

被引：12
|
作者：
Guidugli, Marcela Corbo [1 ]
de Campos, Tatiana [2 ]
Barbosa de Sousa, Adna Cristina [2 ]
Feres, Juliana Massimino [1 ]
Sebbenn, Alexandre Magno [3 ]
Mestriner, Moacyr Antonio [1 ]
Betioli Contel, Eucleia Primo [1 ]
Alzate-Marin, Ana Lilia [1 ]
机构：
[1] Univ Sao Paulo, Fac Med Ribeirao Preto, Dept Genet, Lab Genet Vegetal, BR-14049900 Ribeirao Preto, SP, Brazil
[2] Univ Estadual Campinas, Ctr Biol Mol & Engn Genet, Dept Genet & Evolucao, BR-13083970 Campinas, SP, Brazil
[3] Inst Florestal Sao Paulo, BR-01059970 Sao Paulo, Brazil
来源：
CONSERVATION GENETICS | 2009年 / 10卷 / 04期
基金：
巴西圣保罗研究基金会;
关键词：
Conservation genetics; Forest; Genetic diversity; Jequitiba branco; Molecular marker; SSR;
D O I：
10.1007/s10592-008-9672-4
中图分类号：
X176 [生物多样性保护];
学科分类号：
090705 ;
摘要：
From a genomic library enriched for GA/CA repeats, 15 highly polymorphic microsatellite markers were developed for Cariniana estrellensis, a tropical forest tree. The microsatellite loci were screened in 49 mature trees found between Pardo river and Mogi-Gua double dagger u river basins, in the state of So Paulo, Brazil. A total of 140 alleles were detected with an average of 9.33 alleles per locus. The expected heterozygosity ranged from 0.37 to 0.88. These loci showed a high probability of paternity exclusion. Additionally, 12 loci were effectively transferred to Cariniana legalis. High levels of polymorphism make the present SSR markers useful for population genetic studies.
引用
收藏
页码：1001 / 1004
页数：4
相关论文
共 48 条
  • [1] Development and characterization of 15 microsatellite loci for Cariniana estrellensis and transferability to Cariniana legalis, two endangered tropical tree species
    Marcela Corbo Guidugli
    Tatiana de Campos
    Adna Cristina Barbosa de Sousa
    Juliana Massimino Feres
    Alexandre Magno Sebbenn
    Moacyr Antonio Mestriner
    Eucleia Primo Betioli Contel
    Ana Lilia Alzate-Marin
    [J]. Conservation Genetics, 2009, 10
  • [2] MICROSATELLITE MARKERS FOR CARINIANA LEGALIS (LECYTHIDACEAE) AND THEIR TRANSFERABILITY TO C. ESTRELLENSIS
    Tambarussi, Evandro Vagner
    Sebbenn, Alexandre Magno
    Moreno, Maria Andreia
    Ferraz, Elza Martins
    Kageyama, Paulo Yoshio
    Vencovsky, Roland
    [J]. APPLICATIONS IN PLANT SCIENCES, 2013, 1 (06):
  • [3] Genetic characterization of 12 heterologous microsatellite markers for the giant tropical tree Cariniana legalis (Lecythidaceae)
    Guidugli, Marcela Corbo
    Guerrieri Accoroni, Klaus Alvaro
    Mestriner, Moacyr Antonio
    Betioli Contel, Eucleia Primo
    Martinez, Carlos Alberto
    Alzate-Marin, Ana Lilia
    [J]. GENETICS AND MOLECULAR BIOLOGY, 2010, 33 (01) : 131 - 134
  • [4] Development and characterization of microsatellite loci for Cedrela fissilis Vell (Meliaceae), an endangered tropical tree species
    Gandara, F. B.
    Tambarussi, E. V.
    Sebbenn, A. M.
    Ferraz, E. M.
    Moreno, M. A.
    Ciampi, A. Y.
    Vianello, R. P.
    Grattapaglia, D.
    Kageyama, P. Y.
    [J]. SILVAE GENETICA, 2014, 63 (05) : 240 - 243
  • [5] Characterization of 15 polymorphic microsatellite loci in an endangered tropical tree Hopea bilitonensis (Dipterocarpaceae) in Peninsular Malaysia
    Lee, SL
    Tani, N
    Ng, KKS
    Tsumura, Y
    [J]. MOLECULAR ECOLOGY NOTES, 2004, 4 (02): : 147 - 149
  • [6] Isolation and characterization of microsatellite loci for Hymenaea courbaril and transferability to Hymenaea stigonocarpa, two tropical timber species
    Ciampi, A. Y.
    Azevedo, V. C. R.
    Gaiotto, F. A.
    Ramos, A. C.
    Lovato, M. B.
    [J]. MOLECULAR ECOLOGY RESOURCES, 2008, 8 (05) : 1074 - 1077
  • [7] Storage time affects the germination and proteomic profile of seeds of Cariniana legalis (Mart.) O. Kuntze (Lecythidaceae), an endangered tree species native to the Brazilian Atlantic Forest
    Mesquita Aragao, Victor Paulo
    Campos Trindade, Bianca Machado
    Reis, Ricardo Souza
    Silveira, Vanildo
    Santa-Catarina, Claudete
    [J]. BRAZILIAN JOURNAL OF BOTANY, 2019, 42 (03) : 407 - 419
  • [8] Storage time affects the germination and proteomic profile of seeds of Cariniana legalis (Mart.) O. Kuntze (Lecythidaceae), an endangered tree species native to the Brazilian Atlantic Forest
    Victor Paulo Mesquita Aragão
    Bianca Machado Campos Trindade
    Ricardo Souza Reis
    Vanildo Silveira
    Claudete Santa-Catarina
    [J]. Brazilian Journal of Botany, 2019, 42 : 407 - 419
  • [9] Development and characterization of microsatellite loci for Rhinella marina (Amphibia, Bufonidae) and their transferability to two closely related species
    Bessa-Silva, Adam R.
    da Cunha, Divino B.
    Sodre, Davidson
    da Rocha, Tom J. O.
    Schneider, Horacio
    Sampaio, Iracilda
    Sequeira, Fernando
    Vallinoto, Marcelo
    [J]. CONSERVATION GENETICS RESOURCES, 2015, 7 (01) : 247 - 250
  • [10] Development and characterization of microsatellite loci for Rhinella marina (Amphibia, Bufonidae) and their transferability to two closely related species
    Adam R. Bessa-Silva
    Divino B. da Cunha
    Davidson Sodré
    Tom J. O. da Rocha
    Horacio Schneider
    Iracilda Sampaio
    Fernando Sequeira
    Marcelo Vallinoto
    [J]. Conservation Genetics Resources, 2015, 7 : 247 - 250
12345