Association analyses identify 31 new risk loci for colorectal cancer susceptibility

被引:0
|
作者
Philip J. Law
Maria Timofeeva
Ceres Fernandez-Rozadilla
Peter Broderick
James Studd
Juan Fernandez-Tajes
Susan Farrington
Victoria Svinti
Claire Palles
Giulia Orlando
Amit Sud
Amy Holroyd
Steven Penegar
Evropi Theodoratou
Peter Vaughan-Shaw
Harry Campbell
Lina Zgaga
Caroline Hayward
Archie Campbell
Sarah Harris
Ian J. Deary
John Starr
Laura Gatcombe
Maria Pinna
Sarah Briggs
Lynn Martin
Emma Jaeger
Archana Sharma-Oates
James East
Simon Leedham
Roland Arnold
Elaine Johnstone
Haitao Wang
David Kerr
Rachel Kerr
Tim Maughan
Richard Kaplan
Nada Al-Tassan
Kimmo Palin
Ulrika A. Hänninen
Tatiana Cajuso
Tomas Tanskanen
Johanna Kondelin
Eevi Kaasinen
Antti-Pekka Sarin
Johan G. Eriksson
Harri Rissanen
Paul Knekt
Eero Pukkala
Pekka Jousilahti
机构
[1] The Institute of Cancer Research,Division of Genetics and Epidemiology
[2] University of Edinburgh,Colon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, Western General Hospital
[3] Instituto de Investigación de Santiago,Grupo de Medicina Xenómica, Fundación Pública Galega de Medicina Xenómica
[4] University of Birmingham,Cancer Genetics and Evolution Laboratory, Institute of Cancer and Genomic Sciences
[5] McCarthy Group,Wellcome Centre for Human Genetics
[6] University of Birmingham,Gastrointestinal Cancer Genetics Laboratory, Institute of Cancer and Genomic Sciences
[7] University of Edinburgh,Centre for Global Health Research, Usher Institute
[8] University of Dublin,Department of Public Health and Primary Care, Institute of Population Health, Trinity College Dublin
[9] University of Edinburgh,Medical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, Western General Hospital
[10] University of Edinburgh,Generation Scotland, Centre for Genomic and Experimental Medicine, MRC Institute of Genetics and Molecular Medicine
[11] University of Edinburgh,Centre for Cognitive Ageing and Cognitive Epidemiology
[12] University of Edinburgh,Department of Psychology
[13] University of Edinburgh,Medical Genetics Section, Centre for Genomics and Experimental Medicine, Institute of Genetics and Molecular Medicine
[14] University of Edinburgh,Alzheimer Scotland Dementia Research Centre
[15] University of Oxford,Translational Gastroenterology Unit, Nuffield Department. of Medicine
[16] John Radcliffe Hospital,Cancer Bioinfomatics Laboratory, Institute of Cancer and Genomic Sciences
[17] University of Birmingham,Department of Oncology
[18] University of Oxford,Nuffield Department of Clinical Laboratory Sciences, John Radcliffe Hospital
[19] University of Oxford,Department of Genetics
[20] Medical Research Council Clinical Trials Unit,Department of Medical and Clinical Genetics, Medicum and Genome
[21] King Faisal Specialist Hospital and Research Center,Scale Biology Research Program, Research Programs Unit
[22] University of Helsinki,Institute for Molecular Medicine Finland (FIMM)
[23] University of Helsinki,Unit of General Practice and Primary Health Care
[24] Folkhälsan Research Centre,Finnish Cancer Registry, Institute for Statistical and Epidemiological Cancer Research, Helsinki, Finland, and Faculty of Social Sciences
[25] University of Helsinki and Helsinki University Hospital,Faculty of Social Sciences
[26] National Institute for Health and Welfare,Department of Public Health
[27] University of Tampere,Analytic and Translational Genetics Unit, Department of Medicine
[28] University of Tampere,Department of Surgery, Abdominal Center
[29] University of Helsinki,Department of Pathology
[30] Broad Institute of MIT and Harvard,Department of Surgery
[31] Massachusetts General Hospital,Department of Health Sciences, Faculty of Sport and Health Sciences
[32] Helsinki University Hospital,Colorectal Oncogenomics Group, Department of Clinical Pathology
[33] Central Finland Central Hospital,Victorian Comprehensive Cancer Centre
[34] Jyväskylä Central Hospital,Genomic Medicine and Family Cancer Clinic
[35] University of Jyväskylä,Centre for Epidemiology and Biostatistics
[36] The University of Melbourne,Department of Health Sciences Research
[37] University of Melbourne,Cancer Prevention Program
[38] Centre for Cancer Research,Mount Sinai Hospital
[39] Royal Melbourne Hospital,Center for Public Health Genomics
[40] The University of Melbourne,Human Genomics Research Group, Department of Biomedicine
[41] Mayo Clinic,Department of Genomics, Life & Brain Center
[42] Fred Hutchinson Cancer Research Center,Institute of Human Genetics
[43] Lunenfeld-Tanenbaum Research Institute,Institute for Medical Informatics, Biometry and Epidemiology, University Hospital Essen
[44] Translational Genomics Research Institute (TGen),Centre for Cancer Genetic Epidemiology, Department of Oncology
[45] An Affiliate of City of Hope,Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care
[46] University of Virginia,Department of Non
[47] University of Basel,Communicable Disease Epidemiology
[48] University of Bonn,Genomic Epidemiology Group
[49] University of Bonn School of Medicine & University Hospital Bonn,Division of Breast Cancer Research
[50] University of Duisburg-Essen,Division of Population Health, Health Services Research and Primary Care
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Colorectal cancer (CRC) is a leading cause of cancer-related death worldwide, and has a strong heritable basis. We report a genome-wide association analysis of 34,627 CRC cases and 71,379 controls of European ancestry that identifies SNPs at 31 new CRC risk loci. We also identify eight independent risk SNPs at the new and previously reported European CRC loci, and a further nine CRC SNPs at loci previously only identified in Asian populations. We use in situ promoter capture Hi-C (CHi-C), gene expression, and in silico annotation methods to identify likely target genes of CRC SNPs. Whilst these new SNP associations implicate target genes that are enriched for known CRC pathways such as Wnt and BMP, they also highlight novel pathways with no prior links to colorectal tumourigenesis. These findings provide further insight into CRC susceptibility and enhance the prospects of applying genetic risk scores to personalised screening and prevention.
引用
收藏
相关论文
共 50 条
  • [41] Erratum: Genome-wide association analyses in Han Chinese identify two new susceptibility loci for amyotrophic lateral sclerosis
    Min Deng
    Ling Wei
    Xianbo Zuo
    Yanghua Tian
    Fei Xie
    Panpan Hu
    Chunyan Zhu
    Fengqiong Yu
    Yu Meng
    Honghao Wang
    Fangfang Zhang
    Huijuan Ma
    Rong Ye
    Huaidong Cheng
    Jing Du
    Wenwen Dong
    Shanshan Zhou
    Changqing Wang
    Yu Wang
    Jingye Wang
    Xianwen Chen
    Zhongwu Sun
    Nong Zhou
    Yubao Jiang
    Xiuxiu Liu
    Xiaogang Li
    Nan Zhang
    Na Liu
    Yingjun Guan
    Yongsheng Han
    Yongzhu Han
    Xinyi Lv
    Yu Fu
    Hui Yu
    Chunhua Xi
    Dandan Xie
    Qiyuan Zhao
    Peng Xie
    Xin Wang
    Zhijun Zhang
    Lu Shen
    Yong Cui
    Xianyong Yin
    Hui Cheng
    Bo Liang
    Xiaodong Zheng
    Tatia M C Lee
    Gang Chen
    Fusheng Zhou
    Jan H Veldink
    Nature Genetics, 2013, 45 : 714 - 714
  • [42] THE ASSOCIATION BETWEEN COLORECTAL CANCER SUSCEPTIBILITY LOCI AND COLORECTAL CONVENTIONAL ADENOMAS AND SERRATED POLYPS.
    Burnett-Hartman, Andrea
    Newcomb, Polly
    Hutter, Carolyn
    Peters, Ulrike
    Zhu, Lee-Ching
    Upton, Melissa
    Makar, Karen
    AMERICAN JOURNAL OF EPIDEMIOLOGY, 2013, 177 : S122 - S122
  • [43] Association analyses identify two susceptibility loci 5q31 and 5q22.1 for atopic dermatitis in Chinese Han population
    Jiang, Xiao-Yun
    Zhao, Jin-Hua
    Yu, Chong-Xian
    Fang, Ling
    Zheng, Xiao-Dong
    Yin, Xian-Yong
    Wu, Yan-Yan
    Tang, Xian-Fa
    Zhou, Fu-Sheng
    Zhang, Xue-Jun
    Xiao, Feng-Li
    ASIAN PACIFIC JOURNAL OF ALLERGY AND IMMUNOLOGY, 2017, 35 (04): : 196 - 202
  • [44] Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci (vol 50, pg 928, 2018)
    Schumacher, Fredrick R.
    Al Olama, Ali Amin
    Berndt, Sonja I.
    Benlloch, Sara
    Ahmed, Mahbubl
    Saunders, Edward J.
    Dadaev, Tokhir
    Leongamornlert, Daniel
    Anokian, Ezequiel
    Cieza-Borrella, Clara
    Goh, Chee
    Brook, Mark N.
    Sheng, Xin
    Fachal, Laura
    Dennis, Joe
    Tyrer, Jonathan
    Muir, Kenneth
    Lophatananon, Artitaya
    Stevens, Victoria L.
    Gapstur, Susan M.
    Carter, Brian D.
    Tangen, Catherine M.
    Goodman, Phyllis J.
    Thompson, Ian M., Jr.
    Batra, Jyotsna
    Chambers, Suzanne
    Moya, Leire
    Clements, Judith
    Horvath, Lisa
    Tilley, Wayne
    Risbridger, Gail P.
    Gronberg, Henrik
    Aly, Markus
    Nordstrom, Tobias
    Pharoah, Paul
    Pashayan, Nora
    Schleutker, Johanna
    Tammela, Teuvo L. J.
    Sipeky, Csilla
    Auvinen, Anssi
    Albanes, Demetrius
    Weinstein, Stephanie
    Wolk, Alicja
    Hakansson, Niclas
    West, Catharine M. L.
    Dunning, Alison M.
    Burnet, Neil
    Mucci, Lorelei A.
    Giovannucci, Edward
    Andriole, Gerald L.
    NATURE GENETICS, 2019, 51 (02) : 363 - 363
  • [45] Genome-Wide Meta-Analyses of Breast, Ovarian, and Prostate Cancer Association Studies Identify Multiple New Susceptibility Loci Shared by at Least Two Cancer Types
    Kar, Siddhartha P.
    Beesley, Jonathan
    Al Olama, Ali Amin
    Michailidou, Kyriaki
    Tyrer, Jonathan
    Kote-Jarai, Zsofi A.
    Lawrenson, Kate
    Lindstrom, Sara
    Ramus, Susan J.
    Thompson, Deborah J.
    Kibel, Adam S.
    Dansonka-Mieszkowska, Agnieszka
    Michael, Agnieszka
    Dieffenbach, Aida K.
    Gentry-Maharaj, Aleksandra
    Whittemore, Alice S.
    Wolk, Alicja
    Monteiro, Alvaro
    Peixoto, Ana
    Kierzek, Andrzej
    Cox, Angela
    Rudolph, Anja
    Gonzalez-Neira, Anna
    Wu, Anna H.
    Lindblom, Annika
    Swerdlow, Anthony
    Ziogas, Argyrios
    Ekici, Arif B.
    Burwinkel, Barbara
    Karlan, Beth Y.
    Nordestgaard, Borge G.
    Blomqvist, Carl
    Phelan, Catherine
    McLean, Catriona
    Pearce, Celeste Leigh
    Vachon, Celine
    Cybulski, Cezary
    Slavov, Chavdar
    Stegmaier, Christa
    Maier, Christiane
    Ambrosone, Christine B.
    Hogdall, Claus K.
    Teerlink, Craig C.
    Kang, Daehee
    Tessier, Daniel C.
    Schaid, Daniel J.
    Stram, Daniel O.
    Cramer, Daniel W.
    Neal, David E.
    Eccles, Diana
    CANCER DISCOVERY, 2016, 6 (09) : 1052 - 1067
  • [46] Genome-wide association analyses identify new loci influencing intraocular pressure
    Gao, X. Raymond
    Huang, Hua
    Nannini, Drew R.
    Fan, Fangda
    Kim, Heejin
    HUMAN MOLECULAR GENETICS, 2018, 27 (12) : 2205 - 2213
  • [47] Genome-Wide Association Analyses of HPV16 and HPV18 Seropositivity Identify Susceptibility Loci for Cervical Cancer
    Beckhaus, Theresa
    Kachuri, Linda
    Nakase, Taishi
    Schuermann, Peter
    Eisenblaetter, Rieke
    Geerts, Maya
    Boehmer, Gerd
    Strauss, Hans-Georg
    Hirchenhain, Christine
    Schmidmayr, Monika
    Mueller, Florian
    Fasching, Peter A.
    Haefner, Norman
    Luyten, Alexander
    Jentschke, Matthias
    Hillemanns, Peter
    O'Mara, Tracy A.
    Francis, Stephen S.
    Witte, John S.
    Doerk, Thilo
    Ramachandran, Dhanya
    JOURNAL OF MEDICAL VIROLOGY, 2025, 97 (02)
  • [48] Correction: Corrigendum: Genome-wide association study of colorectal cancer identifies six new susceptibility loci
    Fredrick R. Schumacher
    Stephanie L. Schmit
    Shuo Jiao
    Christopher K. Edlund
    Hansong Wang
    Ben Zhang
    Li Hsu
    Shu-Chen Huang
    Christopher P. Fischer
    John F. Harju
    Gregory E. Idos
    Flavio Lejbkowicz
    Frank J. Manion
    Kevin McDonnell
    Caroline E. McNeil
    Marilena Melas
    Hedy S. Rennert
    Wei Shi
    Duncan C. Thomas
    David J. Van Den Berg
    Carolyn M. Hutter
    Aaron K. Aragaki
    Katja Butterbach
    Bette J. Caan
    Christopher S. Carlson
    Stephen J. Chanock
    Keith R. Curtis
    Charles S. Fuchs
    Manish Gala
    Edward L. Giovannucci
    Stephanie M. Gogarten
    Richard B. Hayes
    Brian Henderson
    David J. Hunter
    Rebecca D. Jackson
    Laurence N. Kolonel
    Charles Kooperberg
    Sébastien Küry
    Andrea LaCroix
    Cathy C. Laurie
    Cecelia A. Laurie
    Mathieu Lemire
    David Levine
    Jing Ma
    Karen W. Makar
    Conghui Qu
    Darin Taverna
    Cornelia M. Ulrich
    Kana Wu
    Suminori Kono
    Nature Communications, 6
  • [49] A Model to Determine Colorectal Cancer Risk Using Common Genetic Susceptibility Loci
    Hsu, Li
    Jeon, Jihyoun
    Brenner, Hermann
    Gruber, Stephen B.
    Schoen, Robert E.
    Berndt, Sonja I.
    Chan, Andrew T.
    Chang-Claude, Jenny
    Du, Mengmeng
    Gong, Jian
    Harrison, Tabitha A.
    Hayes, Richard B.
    Hoffmeister, Michael
    Hutter, Carolyn M.
    Lin, Yi
    Nishihara, Reiko
    Ogino, Shuji
    Prentice, Ross L.
    Schumacher, Fredrick R.
    Seminara, Daniela
    Slattery, Martha L.
    Thomas, Duncan C.
    Thornquist, Mark
    Newcomb, Polly A.
    Potter, John D.
    Zheng, Yingye
    White, Emily
    Peters, Ulrike
    GASTROENTEROLOGY, 2015, 148 (07) : 1330 - +
  • [50] Colorectal Cancer eQTLs as Susceptibility Loci Candidates
    Moreno, V.
    Sole, X.
    Cordero, D.
    Crous-Bou, M.
    Berenguer, A.
    Sanz-Pamplona, R.
    Ruiz-Ponte, C.
    Carracedo, A.
    Castellvi-Bel, S.
    Castells, A.
    EUROPEAN JOURNAL OF CANCER, 2012, 48 : S282 - S282