Mechanism of recognition and repair of damaged DNA by human 8-oxoguanine DNA glycosylase hOGG1

被引:0
|
作者
N. A. Kuznetsov
V. V. Koval
O. S. Fedorova
机构
[1] Siberian Branch of the Russian Academy of Sciences,Institute of Chemical Biology and Fundamental Medicine
来源
Biochemistry (Moscow) | 2011年 / 76卷
关键词
conformational dynamics; pre-steady-state kinetics; human 8-oxoguanine DNA glycosylase; hOGG1;
D O I
暂无
中图分类号
学科分类号
摘要
Recent data on structural and biochemical features of human 8-oxoguanine DNA glycosylase (hOGG1) has enabled detailed evaluation of the mechanism by which the damaged DNA bases are recognized and eliminated from the chain. Pre-steady-state kinetic studies with recording of conformational transitions of the enzyme and DNA substrate significantly contribute to understanding of this mechanism. In this review we particularly focus on the interrelationship between the conformational changes of interacting molecules and kinetics of their interaction and on the nature of each elementary step during the enzymatic process. Exhaustive analysis of these data and detailed mechanism of hOGG1-catalyzed reaction are proposed.
引用
收藏
页码:118 / 130
页数:12
相关论文
共 50 条
  • [31] An electrochemical method to assay human 8-oxoguanine DNA glycosylase 1
    Liu, Fengzhen
    Gao, Tao
    Ye, Zonghuang
    Yang, Dawei
    Wang, Zhaoxia
    Li, Genxi
    ELECTROCHEMISTRY COMMUNICATIONS, 2015, 50 : 51 - 54
  • [32] A Novel Role for the DNA Repair Enzyme 8-Oxoguanine DNA Glycosylase in Adipogenesis
    Komakula, Sai Santosh Babu
    Blaze, Bhavya
    Ye, Hong
    Dobrzyn, Agnieszka
    Sampath, Harini
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (03) : 1 - 14
  • [33] DNA Sequence Context Effects on the Glycosylase Activity of Human 8-Oxoguanine DNA Glycosylase
    Sassa, Akira
    Beard, William A.
    Prasad, Rajendra
    Wilson, Samuel H.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (44) : 36702 - 36710
  • [34] The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase
    Uddhav K. Shigdel
    Victor Ovchinnikov
    Seung-Joo Lee
    Jenny A. Shih
    Martin Karplus
    Kwangho Nam
    Gregory L. Verdine
    Nature Communications, 11
  • [35] Energetic and structural basis for DNA damage recognition by human 8-oxoguanine glycosylase
    Li, Haoquan
    Zharkov, Dmitry O.
    de Los Santos, Carlos
    Grollman, Arthur P.
    Simmerling, Carlos
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 245
  • [36] Excision of 8-oxoguanine from methylated CpG dinucleotides by human 8-oxoguanine DNA glycosylase
    Kasymov, Rustem D.
    Grin, Inga R.
    Endutkin, Anton V.
    Smirnov, Serge L.
    Ishchenko, Alexander A.
    Saparbaev, Murat K.
    Zharkov, Dmitry O.
    FEBS LETTERS, 2013, 587 (18) : 3129 - 3134
  • [37] Free Energy Landscape of Lesion Recognition by Human 8-Oxoguanine DNA N-Glycosylase 1: Mechanistic Insights into Detection and Processing of 8-Oxoguanine in DNA
    Kim, Hyeonjun
    Pak, Youngshang
    Journal of Physical Chemistry B, 2024, 128 (49): : 12133 - 12142
  • [38] Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM
    J. Christopher Fromme
    Gregory L. Verdine
    Nature Structural Biology, 2002, 9 : 544 - 552
  • [39] An ONIOM and MD Investigation of Possible Monofunctional Activity of Human 8-Oxoguanine-DNA Glycosylase (hOgg1)
    Kellie, Jennifer L.
    Wilson, Katie A.
    Wetmore, Stacey D.
    JOURNAL OF PHYSICAL CHEMISTRY B, 2015, 119 (25): : 8013 - 8023
  • [40] Major mitochondrial DNA deletions in obese transgenic mice overexpressing human 8-oxoguanine DNA glycosylase 1 (hOGG1) gene: A causal relationship between mitochondrial DNA damages and obesity
    Xie, C.
    Zhang, H.
    Huang, Q.
    Li, L.
    Higuchi, M.
    Smoller, B. R.
    Fan, C. Y.
    MODERN PATHOLOGY, 2008, 21 : 331A - 331A