Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information

被引:0
|
作者
Jagat S Chauhan
Nitish K Mishra
Gajendra PS Raghava
机构
[1] Institute of Microbial Technology (IMTECH),Bioinformatics Centre
来源
关键词
Support Vector Machine; Support Vector Machine Model; Matthews Correlation Coefficient; Evolutionary Information; Negative Pattern;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] Robust and accurate prediction of protein-protein interactions by exploiting evolutionary information
    Li, Yang
    Wang, Zheng
    Li, Li-Ping
    You, Zhu-Hong
    Huang, Wen-Zhun
    Zhan, Xin-Ke
    Wang, Yan-Bin
    SCIENTIFIC REPORTS, 2021, 11 (01)
  • [32] Prediction of DNA-binding residues from protein sequence information using random forests
    Wang, Liangjiang
    Yang, Mary Qu
    Yang, Jack Y.
    BMC GENOMICS, 2009, 10
  • [33] Prediction of DNA-binding residues from protein sequence information using random forests
    Liangjiang Wang
    Mary Qu Yang
    Jack Y Yang
    BMC Genomics, 10
  • [34] Prediction of protein-protein interactions by label propagation with protein evolutionary and chemical information derived from heterogeneous network
    Wen, Yu-Ting
    Lei, Hai-Jun
    You, Zhu-Hong
    Lei, Bai-Ying
    Chen, Xing
    Li, Li-Ping
    JOURNAL OF THEORETICAL BIOLOGY, 2017, 430 : 9 - 20
  • [35] Ensemble Architecture for Prediction of Enzyme-ligand Binding Residues Using Evolutionary Information
    Pai, Priyadarshini P.
    Dattatreya, Rohit Kadam
    Mondal, Sukanta
    MOLECULAR INFORMATICS, 2017, 36 (11)
  • [36] Improving protein-protein interaction prediction using evolutionary information from low-quality MSAs
    Varnai, Csilla
    Burkoff, Nikolas S.
    Wild, David L.
    PLOS ONE, 2017, 12 (02):
  • [37] Protein folding computed from evolutionary information
    Sander, Chris
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2021, 77 : A256 - A256
  • [38] CPIELA: Computational Prediction of Plant Protein-Protein Interactions by Ensemble Learning Approach From Protein Sequences and Evolutionary Information
    Li, Li-Ping
    Zhang, Bo
    Cheng, Li
    FRONTIERS IN GENETICS, 2022, 13
  • [39] PAIRpred: Partner-specific prediction of interacting residues from sequence and structure
    Minhas, Fayyaz ul Amir Afsar
    Geiss, Brian J.
    Ben-Hur, Asa
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2014, 82 (07) : 1142 - 1155
  • [40] TERTIARY STRUCTURAL CONSTRAINTS ON PROTEIN EVOLUTIONARY DIVERSITY - TEMPLATES, KEY RESIDUES AND STRUCTURE PREDICTION
    OVERINGTON, J
    JOHNSON, MS
    SALI, A
    BLUNDELL, TL
    PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 1990, 241 (1301) : 132 - 145