Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information

被引:0
|
作者
Jagat S Chauhan
Nitish K Mishra
Gajendra PS Raghava
机构
[1] Institute of Microbial Technology (IMTECH),Bioinformatics Centre
来源
关键词
Support Vector Machine; Support Vector Machine Model; Matthews Correlation Coefficient; Evolutionary Information; Negative Pattern;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Combining Physicochemical and Evolutionary Information for Protein Contact Prediction
    Schneider, Michael
    Brock, Oliver
    PLOS ONE, 2014, 9 (10):
  • [22] Inferring protein-protein interacting sites using residue conservation and evolutionary information
    Wang, Bing
    Wong, Hau San
    Huang, De-Shuang
    PROTEIN AND PEPTIDE LETTERS, 2006, 13 (10): : 999 - 1005
  • [23] PROBLEM ON POLYMORPHISM OF THE GTP-BINDING PROTEIN SUBUNITS AND ITS EVOLUTIONARY ASPECTS
    PERTSEVA, MN
    KUZNETZOVA, LA
    UKRAINSKII BIOKHIMICHESKII ZHURNAL, 1990, 62 (03): : 3 - 16
  • [24] Robust and accurate prediction of protein–protein interactions by exploiting evolutionary information
    Yang Li
    Zheng Wang
    Li-Ping Li
    Zhu-Hong You
    Wen-Zhun Huang
    Xin-Ke Zhan
    Yan-Bin Wang
    Scientific Reports, 11
  • [25] A deep learning-based method for the prediction of DNA interacting residues in a protein
    Patiyal, Sumeet
    Dhall, Anjali
    Raghava, Gajendra P. S.
    BRIEFINGS IN BIOINFORMATICS, 2022, 23 (05)
  • [26] Accurate Prediction of ncRNA-Protein Interactions From the Integration of Sequence and Evolutionary Information
    Zhan, Zhao-Hui
    You, Zhu-Hong
    Li, Li-Ping
    Zhou, Yong
    Yi, Hai-Cheng
    FRONTIERS IN GENETICS, 2018, 9
  • [27] Prediction of membrane protein types by exploring local discriminative information from evolutionary profiles
    Kabir, Muhammad
    Arif, Muhammad
    Ali, Farman
    Ahmad, Saeed
    Swati, Zar Nawab Khan
    Yu, Dong-Jun
    ANALYTICAL BIOCHEMISTRY, 2019, 564 : 123 - 132
  • [28] NAGbinder: An approach for identifying N-acetylglucosamine interacting residues of a protein from its primary sequence
    Patiyal, Sumeet
    Agrawal, Piyush
    Kumar, Vinod
    Dhall, Anjali
    Kumar, Rajesh
    Mishra, Gaurav
    Raghava, Gajendra P. S.
    PROTEIN SCIENCE, 2020, 29 (01) : 201 - 210
  • [29] Improving Self-interacting Proteins Prediction Accuracy Using Protein Evolutionary Information and Weighed-extreme Learning Machine
    An, Ji-Yong
    Zhou, Yong
    Zhang, Lei
    Niu, Qiang
    Wang, Da-Fu
    CURRENT BIOINFORMATICS, 2019, 14 (02) : 115 - 122
  • [30] Combining evolutionary and structural information for local protein structure prediction
    Pei, JM
    Grishin, NV
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2004, 56 (04) : 782 - 794