The complete chloroplast genome of Actinidia macrosperma

被引：5
|
作者：
Chen, Yi [1 ]
Xu, Yiqing [2 ]
Zhang, Kai [3 ]
Song, Yanlin [4 ]
He, Qiuyu [5 ]
Qian, Qiuyu [3 ]
Xu, Jian [6 ]
机构：
[1] Sun Nanjing Automat Equipments Co Ltd, Nanjing, Jiangsu, Peoples R China
[2] Nanjing Forestry Univ, Coll Informat Sci & Technol, Nanjing, Jiangsu, Peoples R China
[3] Nanjing Visiable Informat Technol Co Ltd, Nanjing, Jiangsu, Peoples R China
[4] Shandong Agr & Engn Univ, Jinan, Shandong, Peoples R China
[5] Nanjing XiaoZhuang Univ, Nanjing, Jiangsu, Peoples R China
[6] Nanjing Muzhou Software Co Ltd, Nanjing, Jiangsu, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词：
Actinidia macrosperma; chloroplast genome; assembly; phylogenetic analysis; SEQUENCE;
D O I：
10.1080/23802359.2019.1692733
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Actinidia macrosperma (A. macrosperma) is a medicinal plant in China, which has been well known for its activities against leprosy and cancers. In this study, we assembled and characterized the complete chloroplast (cp) genome sequence of A. macrosperma in an effort to provide genomic resources for promoting its conservation. The cp genome is 156,231 bp in length, containing a pair of 23,720 bp inverted repeat (IR) regions, which is separated by a large single copy region (LSC) of 88,214 bp and a small single copy region (SSC) of 20,577 bp. A total of 132 genes were annotated in this cp genome, including 85 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Phylogenetic analysis highly supported that A. macrosperma was evolutionarily close to another Actinidia species Actinidia deliciosa.
引用
收藏
页码：4188 / 4189
页数：2
相关论文
共 50 条
  • [41] The complete chloroplast genome of Syzygium acuminatissimum
    Zeng, Feng
    Deng, Yanwen
    Liu, Xiaozhou
    Zhu, Xuanxi
    Tan, Guangwen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 127 - 128
  • [42] The complete chloroplast genome of Swertia cordata
    Huang, Li
    Chen, Chunlin
    Yang, Qiao
    Yang, Wenjie
    Hu, Quanjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3818 - 3819
  • [43] The complete chloroplast genome of Bothriochloa ischaemum
    Li, Yu-ying
    Xu, Hong-yu
    Zhong, Hua
    Yang, Zhi-qing
    Dong, Kuan-hu
    Xia, Fang-shan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05): : 844 - 845
  • [44] The complete chloroplast genome of Streblus indicus
    Yang, Dejun
    Qiu, Qiong
    Xu, Linhong
    Xu, Yumei
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2815 - 2816
  • [45] The complete chloroplast genome of Cryptotaenia japonica
    Luo, Le
    Yu, Yan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1650 - 1651
  • [46] The complete chloroplast genome of Agave sisalana
    Yang, Xinli
    Huang, Xing
    Tan, Shibei
    Chen, Tao
    Qin, Xu
    Chen, Helong
    Xi, Jingen
    Yi, Kexian
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 1855 - 1856
  • [47] The complete chloroplast genome of Allium macrostemon
    Xie, Fu-Min
    Jiang, Qiu-Ping
    Yu, Yan
    Zhou, Song-Dong
    He, Xing-Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1938 - 1939
  • [48] The complete chloroplast genome of Aristolochia kwangsiensi
    Zhou, Qiang
    Li, Jingling
    Jiang, Mei
    Wang, Liqiang
    Liu, Chang
    Wang, Yuhua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1184 - 1185
  • [49] The complete chloroplast genome ofSpartina alterniflora
    Zhao, Yang
    Wang, Kai
    He, Yingying
    Wang, Yanfeng
    Qu, Changfeng
    Miao, Jinlai
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2440 - 2441
  • [50] The complete chloroplast genome of Notholition macrophyllum
    Li, Juan
    Liu, Haiying
    Xie, Dengfeng
    Zhou, Songdong
    He, Xingjin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 1102 - 1103
12345