De novo assembly and characterisation of the transcriptome of the Beringian pseudoscorpion

被引:2
|
作者
Lebenzon, Jacqueline E. [1 ]
Toxopeus, Jantina [1 ,2 ]
Anthony, Susan E. [1 ]
Sinclair, Brent J. [1 ]
机构
[1] Univ Western Ontario, Dept Biol, 1151 Richmond St N, London, ON N6A 3K7, Canada
[2] St Francis Xavier Univ, Biol Dept, 2321 Notre Dame Ave, Antigonish, NS B2G 2W5, Canada
来源
CANADIAN ENTOMOLOGIST | 2021年 / 153卷 / 03期
基金
加拿大自然科学与工程研究理事会;
关键词
HEAT-SHOCK PROTEINS; SPIDER-VENOM; RNA-SEQ; DEHYDRATION STRESS; ANTARCTIC MITE; LIFE-HISTORY; GENOME; ROLES; UNDERPINNINGS; DEGRADATION;
D O I
10.4039/tce.2021.2
中图分类号
Q96 [昆虫学];
学科分类号
摘要
Pseudoscorpions are microarthropods that are distributed from the equator to beyond the Arctic circle. Wyochernes asiaticus (Arachnida: Pseudoscorpiones: Chernetidae) is the northernmost species of pseudoscorpion and is broadly distributed in Beringia, an Arctic and sub-Arctic region that remained unglaciated during the last glacial maximum. Wyochernes asiaticus is anoxia tolerant and has moderate cold tolerance, but nothing is known about the molecular basis of their survival in Canadian polar environments. We de novo assembled and characterised the transcriptome of W. asiaticus collected from the Yukon Territory in northwestern Canada. We assembled an approximately 62.6-million base-pair transcriptome with a mean contig length of 1277, which was 76% complete, according to a benchmark universal single copy orthologue (BUSCO) analysis. We identified 1100 transcripts encoding proteins associated with stress tolerance in these pseudoscorpions, including heat shock proteins, antioxidants, ubiquitination and proteosomal proteins, and sirtuins. We also identified transcripts encoding putative venom proteins. We highlight eight transcripts with high sequence similarity to sequences of venom proteins (ctenitoxins and agatoxins) described from other pseudoscorpions. Our study yields the first transcriptome of a Beringian arthropod, providing important sequence information that will allow future investigation of how W. asiaticus survives in Canadian polar environments.
引用
收藏
页码:301 / 313
页数:13
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