DeepSanger: A Rapid, Cost-Effective Alternative to Next-Generation Sequencing for Indel Identification and Quantification

被引:0
|
作者
Hsu, Jonathan Y. [1 ,2 ,3 ]
Kleinstiver, Benjamin P. [2 ,3 ]
Joung, J. Keith [2 ,3 ]
Pinello, Luca [2 ,3 ]
机构
[1] MIT, Dept Biol Engn, 77 Massachusetts Ave, Cambridge, MA 02139 USA
[2] Massachusetts Gen Hosp, Mol Pathol Unit, Ctr Computat & Integrat Biol Canc Res, Charlestown, MA USA
[3] Harvard Med Sch, Dept Pathol, Boston, MA USA
关键词
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
362
引用
收藏
页码:169 / 169
页数:1
相关论文
共 50 条
  • [31] Comparison of techniques for quantification of next-generation sequencing libraries
    Hussing, C.
    Kampmann, M. L.
    Mogensen, H. S.
    Borsting, C.
    Morling, N.
    [J]. FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES, 2015, 5 : E276 - E278
  • [32] Identification of indels in next-generation sequencing data
    Aakrosh Ratan
    Thomas L Olson
    Thomas P Loughran
    Webb Miller
    [J]. BMC Bioinformatics, 16
  • [33] Next-Generation Sequencing for Pathogen Detection and Identification
    Frey, Kenneth G.
    Bishop-Lilly, Kimberly A.
    [J]. CURRENT AND EMERGING TECHNOLOGIES FOR THE DIAGNOSIS OF MICROBIAL INFECTIONS, 2015, 42 : 525 - 554
  • [34] Identification of indels in next-generation sequencing data
    Ratan, Aakrosh
    Olson, Thomas L.
    Loughran, Thomas P., Jr.
    Miller, Webb
    [J]. BMC BIOINFORMATICS, 2015, 16
  • [35] Identification of sparganosis based on next-generation sequencing
    Du, Bailu
    Tao, Yue
    Ma, Jing
    Weng, Xing
    Gong, Yanping
    Lin, Yang
    Shen, Nan
    Mo, Xi
    Cao, Qing
    [J]. INFECTION GENETICS AND EVOLUTION, 2018, 66 : 256 - 261
  • [36] Next-Generation 3D Printed Microfluidic Membraneless Enzymatic Biofuel Cell: Cost-Effective and Rapid Approach
    Rewatkar, Prakash
    Goel, Sanket
    [J]. IEEE TRANSACTIONS ON ELECTRON DEVICES, 2019, 66 (08) : 3628 - 3635
  • [37] Personalized and cost-effective detection of copy number variants by molecular-barcode next-generation sequencing and long-read nanopore sequencing
    Kwong, Ava
    Au, Chun H.
    Ho, Dona N.
    Wong, Elaine Y. L.
    Chung, Yvonne
    Law, Fian B. F.
    Ho, Cecilia Y. S.
    Chen, Jiawei
    Cheuk, Isabella W.
    Shin, Vivian Y.
    Chan, Tsun L.
    Ngan, Hextan Y. S.
    Ma, Edmond S. K.
    [J]. CANCER RESEARCH, 2020, 80 (04)
  • [38] Next generation sequencing as an efficient and cost-effective method of HIV drug resistance surveillance
    Ji, H.
    Masse, N.
    Tyler, S.
    Liang, B.
    Li, Y.
    Merks, H.
    Graham, M.
    Sandstrom, P.
    Brooks, J.
    [J]. ANTIVIRAL THERAPY, 2009, 14 (04) : A124 - A124
  • [39] Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing
    Kraaijeveld, Ken
    De Weger, Letty A.
    Garcia, Marina Ventayol
    Buermans, Henk
    Frank, Jeroen
    Hiemstra, Pieter S.
    Den Dunnen, Johan T.
    [J]. MOLECULAR ECOLOGY RESOURCES, 2015, 15 (01) : 8 - 16
  • [40] Myeloseq One: A Cost Effective Integrated Next-generation Sequencing Assay for Myeloid Malignancies
    Kodgule, R.
    Raval, G.
    Kakirde, C.
    Bhanshe, P.
    Kadechkar, S.
    Naeem, F.
    Shetty, V.
    Chaudhary, S.
    Joshi, S.
    Tembhare, P.
    Subramanian, P.
    Gujral, S.
    Patkar, N.
    [J]. JOURNAL OF MOLECULAR DIAGNOSTICS, 2018, 20 (06): : 924 - 924