Structural and dynamic properties of four-way helical junctions in DNA molecules

被引:0
|
作者
Lilley, DMJ [1 ]
机构
[1] Univ Dundee, Dept Biochem, Canc Res UK Nucle Acid Struct Res Grp, Dundee DD1 5EH, Scotland
来源
NUCLEIC ACIDS: CURVATURE AND DEFORMATION: RECENT ADVANCES AND NEW PARADIGMS | 2004年 / 884卷
关键词
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Four-way helical junctions in DNA are the central intermediates in genetic recombination. In the presence of divalent metal ions they fold into the stacked X-structure by the pairwise coaxial stacking of helical arms. Exchange between alternative stacking conformers occurs in solution. The structure of four-way junctions is specifically recognised by proteins, notably by the resolving enzymes.
引用
收藏
页码:145 / 164
页数:20
相关论文
共 50 条
  • [31] Structural recognition between a four-way DNA junction and a resolving enzyme
    Declais, Anne-Cecile
    Liu, Jia
    Freeman, Alasdair D. J.
    Lilley, David M. J.
    JOURNAL OF MOLECULAR BIOLOGY, 2006, 359 (05) : 1261 - 1276
  • [32] Folding/Unfolding Thermodynamics of Three-Way and Four-Way Junctions
    Marky, Luis A.
    Carr, Carolyn E.
    BIOPHYSICAL JOURNAL, 2018, 114 (03) : 86A - 86A
  • [33] The Holliday junction in an inverted repeat DNA sequence: Sequence effects on the structure of four-way junctions
    Eichman, BF
    Vargason, JM
    Mooers, BHM
    Ho, PS
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (08) : 3971 - 3976
  • [34] Fission yeast nascent polypeptide-associated complex binds to four-way DNA junctions
    Whitby, MC
    Dixon, J
    JOURNAL OF MOLECULAR BIOLOGY, 2001, 306 (04) : 703 - 716
  • [35] Single Molecule FRET Measures Structure and Fast Dynamics of DNA and RNA Four-Way Junctions
    Seidel, Claus A. M.
    Kalinin, Stanislav
    Felekyan, Suren
    Valeri, Alessandro
    Sindbert, Simon
    BIOPHYSICAL JOURNAL, 2010, 98 (03) : 266A - 266A
  • [36] The Archaeal Topoisomerase Reverse Gyrase Is a Helix-destabilizing Protein That Unwinds Four-way DNA Junctions
    Valenti, Anna
    Perugino, Giuseppe
    Varriale, Antonio
    D'Auria, Sabato
    Rossi, Mose
    Ciaramella, Maria
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2010, 285 (47) : 36532 - 36541
  • [37] Molecular scale architecture:: Engineered three- and four-way junctions
    Wilkinson, Stephanie
    Diechtierow, Michael
    Estabrook, R. August
    Schmidt, Falk
    Hueben, Michael
    Weinhold, Elmar
    Reich, Norbert O.
    BIOCONJUGATE CHEMISTRY, 2008, 19 (02) : 470 - 475
  • [38] Histone-like protein HU from Deinococcus radiodurans binds preferentially to four-way DNA junctions
    Ghosh, S
    Grove, A
    JOURNAL OF MOLECULAR BIOLOGY, 2004, 337 (03) : 561 - 571
  • [39] Histone-like protein HU from Deinococcus radiodurans binds preferentially to four-way DNA junctions
    Ghosh, S
    Grove, A
    FASEB JOURNAL, 2004, 18 (08): : C199 - C199
  • [40] Exchange between stacking conformers in a four-way DNA junction
    Grainger, RJ
    Murchie, AIH
    Lilley, DMJ
    BIOCHEMISTRY, 1998, 37 (01) : 23 - 32