Adaptive Gaussian Markov random fields with applications in human brain mapping

被引:32
|
作者
Brezger, A. [1 ]
Fahrmeir, L. [1 ]
Hennerfeind, A. [1 ]
机构
[1] Univ Munich, Inst Stat, D-80539 Munich, Germany
关键词
adaptive weights; human brain mapping; inhomogeneous Markov random fields; Markov chain Monte Carlo methods; space-varying coefficient models; spatiotemporal modelling;
D O I
10.1111/j.1467-9876.2007.00580.x
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
Functional magnetic resonance imaging has become a standard technology in human brain mapping. Analyses of the massive spatiotemporal functional magnetic resonance imaging data sets often focus on parametric or non-parametric modelling of the temporal component, whereas spatial smoothing is based on Gaussian kernels or random fields. A weakness of Gaussian spatial smoothing is underestimation of activation peaks or blurring of high curvature transitions between activated and non-activated regions of the brain. To improve spatial adaptivity, we introduce a class of inhomogeneous Markov random fields with stochastic interaction weights in a space-varying coefficient model. For given weights, the random field is conditionally Gaussian, but marginally it is non-Gaussian. Fully Bayesian inference, including estimation of weights and variance parameters, can be carried out through efficient Markov chain Monte Carlo simulation. Although motivated by the analysis of functional magnetic resonance imaging data, the methodological development is general and can also be used for spatial smoothing and regression analysis of areal data on irregular lattices. An application to stylized artificial data and to real functional magnetic resonance imaging data from a visual stimulation experiment demonstrates the performance of our approach in comparison with Gaussian and robustified non-Gaussian Markov random-field models.
引用
收藏
页码:327 / 345
页数:19
相关论文
共 50 条
  • [41] Efficient Inference of Spatially-Varying Gaussian Markov Random Fields With Applications in Gene Regulatory Networks
    Ravikumar, Visweswaran
    Xu, Tong
    Al-Holou, Wajd N.
    Fattahi, Salar
    Rao, Arvind
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 20 (05) : 2920 - 2932
  • [43] An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach
    Lindgren, Finn
    Rue, Havard
    Lindstrom, Johan
    JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 2011, 73 : 423 - 498
  • [44] Markov random fields model and applications to image processing
    Smii, Boubaker
    AIMS MATHEMATICS, 2022, 7 (03): : 4459 - 4471
  • [45] Learning non-linear structures with Gaussian Markov random fields
    Fontanella, Sara
    Fontanella, Lara
    Ippoliti, Luigi
    Valentini, Pasquale
    SPATIAL STATISTICS CONFERENCE 2015, PART 1, 2015, 26 : 38 - 44
  • [46] Infrared Texture Simulation Using Gaussian-Markov Random Fields
    Xiao-peng Shao
    Xiao-ming Zhao
    Jun Xu
    Jian-qi Zhang
    International Journal of Infrared and Millimeter Waves, 2004, 25 : 1699 - 1710
  • [47] Infrared texture simulation using Gaussian-Markov random fields
    Shao, XP
    Zhao, XM
    Xu, J
    Zhang, JQ
    INTERNATIONAL JOURNAL OF INFRARED AND MILLIMETER WAVES, 2004, 25 (11): : 1699 - 1710
  • [48] Rejoinder on: Some recent work on multivariate Gaussian Markov random fields
    Ying C. MacNab
    TEST, 2018, 27 : 554 - 569
  • [49] Modeling material stress using integrated Gaussian Markov random fields
    Marcy, Peter W.
    Vander Wiel, Scott A.
    Storlie, Curtis B.
    Livescu, Veronica
    Bronkhorst, Curt A.
    JOURNAL OF APPLIED STATISTICS, 2020, 47 (09) : 1616 - 1636
  • [50] Transformed Gaussian Markov random fields and spatial modeling of species abundance
    Prates, Marcos O.
    Dey, Dipak K.
    Willig, Michael R.
    Yan, Jun
    SPATIAL STATISTICS, 2015, 14 : 382 - 399