Cellular Potts modeling of complex multicellular behaviors in tissue morphogenesis

被引：67

作者：

Hirashima, Tsuyoshi ^{[1
]}

Rens, Elisabeth G. ^{[2
,3
]}

Merks, Roeland M. H. ^{[2
,3
]}

机构：

[1] Kyoto Univ, Inst Frontier Life & Med Sci, Sakyo Ku, 53 Kawahara, Kyoto 6068507, Japan

[2] Ctr Wiskunde & Informat, Life Sci Grp, Sci Pk 123, NL-1098 XG Amsterdam, Netherlands

[3] Leiden Univ, Math Inst, Niels Bohrweg 1, NL-2333 CA Leiden, Netherlands

来源：

DEVELOPMENT GROWTH & DIFFERENTIATION | 2017年 / 59卷 / 05期

关键词：

blood vessel formation; cellular Potts model; cystogenesis; tube morphogenesis; DIFFERENTIAL ADHESION; KIDNEY DEVELOPMENT; BRANCHING MORPHOGENESIS; DEVELOPMENTAL BIOLOGY; CONVERGENT EXTENSION; SURFACE MECHANICS; SYSTEMS BIOLOGY; IN-VITRO; CELLS; ANGIOGENESIS;

D O I：

10.1111/dgd.12358

中图分类号：

Q2 [细胞生物学];

学科分类号：

071009 ; 090102 ;

摘要：

Mathematical modeling is an essential approach for the understanding of complex multicellular behaviors in tissue morphogenesis. Here, we review the cellular Potts model (CPM; also known as the Glazier-Graner-Hogeweg model), an effective computational modeling framework. We discuss its usability for modeling complex developmental phenomena by examining four fundamental examples of tissue morphogenesis: (i) cell sorting, (ii)cyst formation, (iii) tube morphogenesis in kidney development, and (iv) blood vessel formation. The review provides an introduction for biologists for starting simulation analysis using the CPM framework.

引用

页码：329 / 339

页数：11

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