OpenKBP: The open-access knowledge-based planning grand challenge and dataset

被引:63
|
作者
Babier, Aaron [1 ]
Zhang, Binghao [1 ]
Mahmood, Rafid [1 ]
Moore, Kevin L. [2 ]
Purdie, Thomas G. [3 ,4 ]
McNiven, Andrea L. [3 ,4 ]
Chan, Timothy C. Y. [1 ,5 ]
机构
[1] Univ Toronto, Dept Mech & Ind Engn, 5 Kings Coll Rd, Toronto, ON M5S 3G8, Canada
[2] Univ Calif San Diego, Dept Radiat Oncol, 3855 Hlth Sci Dr, La Jolla, CA 92104 USA
[3] UHN Princess Margaret Canc Ctr, Radiat Med Program, 610 Univ Ave, Toronto, ON M5T 2M9, Canada
[4] Univ Toronto, Dept Radiat Oncol, 148-150 Coll St, Toronto, ON M5S 3S2, Canada
[5] Techna Inst Adv Technol Hlth, 124-100 Coll St, Toronto, ON M5G 1P5, Canada
关键词
automated planning; computer vision; equity; diversity; and inclusion; knowledge-based planning; machine learning; public dataset; DOSE PREDICTION; AT-RISK; OPTIMIZATION; QUALITY;
D O I
10.1002/mp.14845
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose To advance fair and consistent comparisons of dose prediction methods for knowledge-based planning (KBP) in radiation therapy research. Methods We hosted OpenKBP, a 2020 AAPM Grand Challenge, and challenged participants to develop the best method for predicting the dose of contoured computed tomography (CT) images. The models were evaluated according to two separate scores: (a) dose score, which evaluates the full three-dimensional (3D) dose distributions, and (b) dose-volume histogram (DVH) score, which evaluates a set DVH metrics. We used these scores to quantify the quality of the models based on their out-of-sample predictions. To develop and test their models, participants were given the data of 340 patients who were treated for head-and-neck cancer with radiation therapy. The data were partitioned into training (n=200), validation (n=40), and testing (n=100) datasets. All participants performed training and validation with the corresponding datasets during the first (validation) phase of the Challenge. In the second (testing) phase, the participants used their model on the testing data to quantify the out-of-sample performance, which was hidden from participants and used to determine the final competition ranking. Participants also responded to a survey to summarize their models. Results The Challenge attracted 195 participants from 28 countries, and 73 of those participants formed 44 teams in the validation phase, which received a total of 1750 submissions. The testing phase garnered submissions from 28 of those teams, which represents 28 unique prediction methods. On average, over the course of the validation phase, participants improved the dose and DVH scores of their models by a factor of 2.7 and 5.7, respectively. In the testing phase one model achieved the best dose score (2.429) and DVH score (1.478), which were both significantly better than the dose score (2.564) and the DVH score (1.529) that was achieved by the runner-up models. Lastly, many of the top performing teams reported that they used generalizable techniques (e.g., ensembles) to achieve higher performance than their competition. Conclusion OpenKBP is the first competition for knowledge-based planning research. The Challenge helped launch the first platform that enables researchers to compare KBP prediction methods fairly and consistently using a large open-source dataset and standardized metrics. OpenKBP has also democratized KBP research by making it accessible to everyone, which should help accelerate the progress of KBP research. The OpenKBP datasets are available publicly to help benchmark future KBP research.
引用
收藏
页码:5549 / 5561
页数:13
相关论文
共 50 条
  • [41] KNOWLEDGE-BASED PLANNING OF DISTRIBUTION NETWORKS
    BRAUNER, G
    ZOBEL, M
    IEEE TRANSACTIONS ON POWER SYSTEMS, 1994, 9 (02) : 942 - 948
  • [42] A KNOWLEDGE-BASED APPROACH TO PRODUCTION PLANNING
    DUCHESSI, P
    OKEEFE, RM
    JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY, 1990, 41 (05) : 377 - 390
  • [43] An International Validation of Knowledge-Based Planning
    Babier, A.
    Zhang, B.
    Mahmood, R.
    Alves, V. G. L.
    Montero, A. Barragan
    Beaudry, J.
    Cardenas, C.
    Chang, Y.
    Chen, Z.
    Chun, J.
    Eraso, H.
    Faustmann, E.
    Gaj, S.
    Gay, S.
    Gronberg, M.
    He, J.
    Heilemann, G.
    Hira, S.
    Huang, Y.
    Ji, F.
    Jiang, D.
    Giraldo, J. Jimenez
    Lee, H.
    Lian, J.
    Liu, K.
    Liu, S.
    Marixa, K.
    Marrugo, J.
    Miki, K.
    Netherton, T.
    Nguyen, D.
    Nourzadeh, H.
    Osman, A.
    Peng, Z.
    Munoz, J. Quinto
    Ramsl, C.
    Rhee, D.
    Arciniegas, J. Rodriguez
    Shan, H.
    Siebers, J. V.
    Soomro, M. H.
    Sun, K.
    Hoyos, A. Usuga
    Valderrama, C.
    Verbeek, R.
    Wang, E.
    Willems, S.
    Wu, Q.
    Xu, X.
    Yang, S.
    MEDICAL PHYSICS, 2021, 48 (06)
  • [44] CommonKADS models for knowledge-based planning
    Kingston, J
    Shadbolt, N
    Tate, A
    PROCEEDINGS OF THE THIRTEENTH NATIONAL CONFERENCE ON ARTIFICIAL INTELLIGENCE AND THE EIGHTH INNOVATIVE APPLICATIONS OF ARTIFICIAL INTELLIGENCE CONFERENCE, VOLS 1 AND 2, 1996, : 477 - 482
  • [45] Advisor: A knowledge-based planning system
    Marinagi, CC
    Panayiotopoulos, T
    Vouros, GA
    Spyropoulos, CD
    INTERNATIONAL JOURNAL OF EXPERT SYSTEMS, 1996, 9 (03): : 319 - 355
  • [46] Knowledge-based planning for Gamma Knife
    Zhang, Binghao
    Babier, Aaron
    Ruschin, Mark
    Chan, Timothy C. Y.
    MEDICAL PHYSICS, 2024, 51 (05) : 3207 - 3219
  • [47] Revisiting the "Quartz Problem" in Lithic Studies: A Review and New, Open-access, Experimental Dataset
    Spry, Caroline
    Kurpiel, Rebekah
    Foley, Elizabeth
    Penzo-Kajewski, Paul
    LITHIC TECHNOLOGY, 2022, 47 (02) : 171 - 181
  • [48] An open-access dataset of crop production by farm size from agricultural censuses and surveys
    Ricciardi, Vincent
    Ramankutty, Navin
    Mehrabi, Zia
    Jarvis, Larissa
    Chookolingo, Brenton
    DATA IN BRIEF, 2018, 19 : 1970 - 1988
  • [49] Open-Access fNIRS Dataset for Classification of Unilateral Finger- and Foot-Tapping
    Bak, SuJin
    Park, Jinwoo
    Shin, Jaeyoung
    Jeong, Jichai
    ELECTRONICS, 2019, 8 (12)
  • [50] An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD)
    Rapuano, Kristina M.
    Conley, May I.
    Juliano, Anthony C.
    Conan, Gregory M.
    Maza, Maria T.
    Woodman, Kylie
    Martinez, Steven A.
    Earl, Eric
    Perrone, Anders
    Feczko, Eric
    Fair, Damien A.
    Watts, Richard
    Casey, B. J.
    Rosenberg, Monica D.
    NEUROIMAGE, 2022, 255