A potential field segmentation based method for tumor segmentation on multi-parametric MRI of glioma cancer patients

被引:12
|
作者
Sun, Ranran [1 ]
Wang, Keqiang [1 ,2 ]
Guo, Lu [1 ]
Yang, Chengwen [1 ,3 ]
Chen, Jie [3 ]
Ti, Yalin [4 ]
Sa, Yu [1 ]
机构
[1] Tianjin Univ, Dept Biomed Engn, 92 Weijin Rd, Tianjin 300072, Peoples R China
[2] Tianjin Med Univ Gen Hosp, Dept Radiotherapy, Tianjin 300052, Peoples R China
[3] Tianjin Canc Hosp, Dept Radiat Oncol, Tianjin 300060, Peoples R China
[4] GE Healthcare, Global Res Org, Shanghai 201203, Peoples R China
关键词
Brain tumor; Functional magnetic resonance imaging; Fusion; Semi-automatic segmentation; TARGET VOLUME DELINEATION; BRAIN; CLASSIFICATION; RADIOTHERAPY; DIFFUSION; REGIONS;
D O I
10.1186/s12880-019-0348-y
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
BackgroundAccurate segmentation of brain tumors is vital for the gross tumor volume (GTV) definition in radiotherapy. Functional MR images like apparent diffusion constant (ADC) and fractional anisotropy (FA) images can provide more comprehensive information for sensitive detection of the GTV. We synthesize anatomical and functional MRI for accurate and semi-automatic segmentation of GTVs and improvement of clinical efficiency.MethodsFour MR image sets including T1-weighted contrast-enhanced (T1C), T2-weighted (T2), apparent diffusion constant (ADC) and fractional anisotropy (FA) images of 5 glioma patients were acquired and registered. A new potential field segmentation (PFS) method was proposed based on the concept of potential field in physics. For T1C, T2 and ADC images, global potential field segmentation (global-PFS) was used on user defined region of interest (ROI) for rough segmentation and then morphologically processed for accurate delineation of the GTV. For FA images, white matter (WM) was removed using local potential field segmentation (local-PFS), and then tumor extent was delineated with region growing and morphological methods. The individual segmentations of multi-parametric images were ensembled into a fused segmentation, considered as final GTV. GTVs were compared with manually delineated ground truth and evaluated with segmentation quality measure (Q), Dice's similarity coefficient (DSC) and Sensitivity and Specificity.ResultsExperimental study with the five patients' data and new method showed that, the mean values of Q, DSC, Sensitivity and Specificity were 0.80 (0.07), 0.88 (+/- 0.04), 0.92 (+/- 0.01) and 0.88 (+/- 0.05) respectively. The global-PFS used on ROIs of T1C, T2 and ADC images can avoid interferences from skull and other non-tumor areas. Similarity to local-PFS on FA images, it can also reduce the time complexity as compared with the global-PFS on whole image sets.Conclusions Efficient and semi-automatic segmentation of the GTV can be achieved with the new method. Combination of anatomical and functional MR images has the potential to provide new methods and ideas for target definition in radiotherapy.
引用
收藏
页数:9
相关论文
共 50 条
  • [31] Explainable AI for CNN-based prostate tumor segmentation in multi-parametric MRI correlated to whole mount histopathology
    Gunashekar, Deepa Darshini
    Bielak, Lars
    Haegele, Leonard
    Oerther, Benedict
    Benndorf, Matthias
    Grosu, Anca-L
    Brox, Thomas
    Zamboglou, Constantinos
    Bock, Michael
    RADIATION ONCOLOGY, 2022, 17 (01)
  • [32] MoSID: Modality-Specific Information Disentanglement from Multi-parametric MRI for Breast Tumor Segmentation
    Zhang, Jiadong
    Chen, Qianqian
    Zhou, Luping
    Cui, Zhiming
    Gao, Fei
    Li, Zhenhui
    Feng, Qianjin
    Shen, Dinggang
    CANCER PREVENTION THROUGH EARLY DETECTION, CAPTION 2023, 2023, 14295 : 94 - 104
  • [33] Evaluating Scale Attention Network for Automatic Brain Tumor Segmentation with Large Multi-parametric MRI Database
    Yuan, Yading
    BRAINLESION: GLIOMA, MULTIPLE SCLEROSIS, STROKE AND TRAUMATIC BRAIN INJURIES, BRAINLES 2021, PT II, 2022, 12963 : 42 - 53
  • [34] Ensemble CNN Networks for GBM Tumors Segmentation Using Multi-parametric MRI
    Zeineldin, Ramy A.
    Karar, Mohamed E.
    Mathis-Ullrich, Franziska
    Burgert, Oliver
    BRAINLESION: GLIOMA, MULTIPLE SCLEROSIS, STROKE AND TRAUMATIC BRAIN INJURIES, BRAINLES 2021, PT I, 2022, 12962 : 473 - 483
  • [35] Multi-parametric PET/MRI for enhanced tumor characterization of patients with cervical cancer
    Sahar Ahangari
    Flemming Littrup Andersen
    Naja Liv Hansen
    Trine Jakobi Nøttrup
    Anne Kiil Berthelsen
    Jesper Folsted Kallehauge
    Ivan Richter Vogelius
    Andreas Kjaer
    Adam Espe Hansen
    Barbara Malene Fischer
    European Journal of Hybrid Imaging, 6
  • [36] A neural ordinary differential equation model for visualizing deep neural network behaviors in multi-parametric MRI-based glioma segmentation
    Yang, Zhenyu
    Hu, Zongsheng
    Ji, Hangjie
    Lafata, Kyle
    Vaios, Eugene
    Floyd, Scott
    Yin, Fang-Fang
    Wang, Chunhao
    MEDICAL PHYSICS, 2023, 50 (08) : 4825 - 4838
  • [37] Multi-parametric PET/MRI for enhanced tumor characterization of patients with cervical cancer
    Ahangari, Sahar
    Andersen, Flemming Littrup
    Hansen, Naja Liv
    Nottrup, Trine Jakobi
    Berthelsen, Anne Kiil
    Kallehauge, Jesper Folsted
    Vogelius, Ivan Richter
    Kjaer, Andreas
    Hansen, Adam Espe
    Fischer, Barbara Malene
    EUROPEAN JOURNAL OF HYBRID IMAGING, 2022, 6 (01):
  • [38] Multi-Atlas and Learning Based Segmentation of Head and Neck Normal Structures From Multi-Parametric MRI
    Veeraraghavan, H.
    Tyagi, N.
    Hunt, M.
    Lee, N.
    Deasy, J.
    MEDICAL PHYSICS, 2015, 42 (06) : 3541 - 3541
  • [39] Deep Learning Model Integrating Dilated Convolution and Deep Supervision for Brain Tumor Segmentation in Multi-parametric MRI
    Zhou, Tongxue
    Ruan, Su
    Hu, Haigen
    Canu, Stephane
    MACHINE LEARNING IN MEDICAL IMAGING (MLMI 2019), 2019, 11861 : 574 - 582
  • [40] MRI Brain Tumour Segmentation using a CNN Over a Multi-parametric Feature Extraction
    Martinez, Elizabeth
    Calderon, Camilo
    Garcia, Hans
    Arguello, Henry
    2020 IEEE COLOMBIAN CONFERENCE ON APPLICATIONS OF COMPUTATIONAL INTELLIGENCE (IEEE COLCACI 2020), 2020,