Characterization of the complete chloroplast genome of Amorphophallus konjac (Araceae) and its phylogenetic analysis

被引:10
|
作者
Hu, Huan [1 ]
Liu, Jianguo [1 ]
Wang, Beilei [1 ]
An, Jiaxing [2 ]
Wang, Qian [1 ]
机构
[1] Zunyi Med Univ, Res Ctr Med & Biol, Higher Educ Inst Guizhou Prov, Special Key Lab Microbial Resources & Drug Dev, Zunyi 563003, Peoples R China
[2] Zunyi Med Univ, Affiliated Hosp, Dept Gastroenterol, Zunyi, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
基金
中国国家自然科学基金;
关键词
Amorphophallus konjac; Araceae; chloroplast genome; phylogenetic analysis; ALIGNMENT;
D O I
10.1080/23802359.2019.1606683
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The whole chloroplast genome of Amorphophallus konjac is determined in this study. The genome size was 161,647 bp in length, containing a large single copy region of 90k bp and a small single copy region of 20k bp, which were separated by a pair of 25,722 bp inverted repeat regions. The complete chloroplast genome contained 131 genes, including 86 coding-protein (79 PCG species), 8 rRNA (4 rRNA species), and 37 tRNA genes (30 tRNA species). Based on the phylogenetic analysis, the genus Amorphophallus, represented by A. konjac might show a close relationship with Pinellia and Colocasia by the limited data for current. These complete chloroplast genomes of A. konjac laid a good foundation for population genomics, molecular, and ecological studies of Amorphophallus.
引用
收藏
页码:1658 / 1659
页数:2
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