Alternative Splicing of Transcription Factors' Genes: Beyond the Increase of Proteome Diversity

被引:11
|
作者
Talavera, David [1 ,2 ,3 ]
Orozco, Modesto [1 ,4 ,5 ,6 ]
de la Cruz, Xavier [1 ,7 ,8 ]
机构
[1] IRB, Mol Modelling & Bioinformat Unit, Barcelona Sci Pk PCB, Barcelona 08028, Spain
[2] European Bioinformat Inst EMBL, Cambridge CB10 1SD, England
[3] Univ Manchester, Fac Life Sci, Manchester M13 9PL, Lancs, England
[4] Genoma Espana, Prot Struct & Modelling Node, Barcelona Sci Pk PCB, Spanish Natl Bioinformat Inst, Barcelona 08028, Spain
[5] Univ Barcelona, Fac Biol, Dept Bioquim & Biol Mol, E-08028 Barcelona, Spain
[6] Barcelona Supercomp Ctr, Dept Life Sci, Barcelona 08034, Spain
[7] ICREA, Barcelona 08010, Spain
[8] Inst Biol Mol Barcelona, Consejo Super Invest Cient, Barcelona 08028, Spain
关键词
EXPRESSION PROFILES; FUNCTIONAL DIVERSITY; MESSENGER-RNA; ISOFORMS; MOUSE; MECHANISMS; CONSERVATION; EVOLUTION; RECEPTOR; GENOME;
D O I
10.1155/2009/905894
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Functional modification of transcription regulators may lead to developmental changes and phenotypical differences between species. In this work, we study the influence of alternative splicing on transcription factors in human and mouse. Our results show that the impact of alternative splicing on transcription factors is similar in both species, meaning that the ways to increase variability should also be similar. However, when looking at the expression patterns of transcription factors, we observe that they tend to diverge regardless of the role of alternative splicing. Finally, we hypothesise that transcription regulation of alternatively spliced transcription factors could play an important role in the phenotypical differences between species, without discarding other phenomena or functional families. Copyright (C) 2009 David Talavera et al.
引用
下载
收藏
页数:6
相关论文
共 50 条
  • [21] Detection of Proteome Diversity Resulted from Alternative Splicing is Limited by Trypsin Cleavage Specificity
    Wang, Xiaojing
    Codreanu, Simona G.
    Wen, Bo
    Li, Kai
    Chambers, Matthew C.
    Liebler, Daniel C.
    Zhang, Bing
    MOLECULAR & CELLULAR PROTEOMICS, 2018, 17 (03) : 422 - 430
  • [22] Analysis of the human neurexin genes: Alternative splicing and the generation of protein diversity
    Rowen, L
    Young, J
    Birditt, B
    Kaur, A
    Madan, A
    Philipps, DL
    Qin, SZ
    Minx, P
    Wilson, RK
    Hood, L
    Graveley, BR
    GENOMICS, 2002, 79 (04) : 587 - 597
  • [23] Coupling transcription and alternative splicing
    Kornblihtt, Alberto R.
    ALTERNATIVE SPLICING IN THE POSTGENOMIC ERA, 2007, 623 : 175 - 189
  • [24] Coupling transcription with alternative splicing
    Kornblihtt, A.
    de la Mata, M.
    Munoz, M.
    Alle, M.
    Santangelo, S. Pancrez
    Rascovan, N.
    Schor, I.
    FEBS JOURNAL, 2007, 274 : 56 - 56
  • [25] Diversification of the muscle proteome through alternative splicing
    Nakka, Kiran
    Ghigna, Claudia
    Gabellini, Davide
    Dilworth, F. Jeffrey
    SKELETAL MUSCLE, 2018, 8
  • [26] Diversification of the muscle proteome through alternative splicing
    Kiran Nakka
    Claudia Ghigna
    Davide Gabellini
    F. Jeffrey Dilworth
    Skeletal Muscle, 8
  • [27] Alternative Splicing May Not Be the Key to Proteome Complexity
    Tress, Michael L.
    Abascal, Federico
    Valencia, Alfonso
    TRENDS IN BIOCHEMICAL SCIENCES, 2017, 42 (02) : 98 - 110
  • [28] Perspective on Alternative Splicing and Proteome Complexity in Plants
    Chaudhary, Saurabh
    Jabre, Ibtissam
    Reddy, Anireddy S. N.
    Staiger, Dorothee
    Syed, Naeem H.
    TRENDS IN PLANT SCIENCE, 2019, 24 (06) : 496 - 506
  • [29] ALTERNATIVE SPLICING OF BETA SUBUNIT GENES CONTRIBUTES TO MOLECULAR DIVERSITY OF CALCIUM CHANNELS
    CASTELLANO, A
    PEREZREYES, E
    BAGGSTROM, E
    BIRNBAUMER, L
    FASEB JOURNAL, 1992, 6 (01): : A245 - A245