Machine-learning techniques for macromolecular crystallization data

被引:6
|
作者
Gopalakrishnan, V
Livingston, G
Hennessy, D
Buchanan, B
Rosenberg, JM [1 ]
机构
[1] Univ Pittsburgh, Dept Biol Sci, Pittsburgh, PA 15260 USA
[2] Univ Pittsburgh, Intelligent Syst Lab, Pittsburgh, PA 15260 USA
[3] Univ Pittsburgh, Dept Med, Pittsburgh, PA 15260 USA
[4] Univ Pittsburgh, Dept Crystallog, Pittsburgh, PA 15260 USA
关键词
D O I
10.1107/S090744490401683X
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Systematizing belief systems regarding macromolecular crystallization has two major advantages: automation and clarification. In this paper, methodologies are presented for systematizing and representing knowledge about the chemical and physical properties of additives used in crystallization experiments. A novel autonomous discovery program is introduced as a method to prune rule-based models produced from crystallization data augmented with such knowledge. Computational experiments indicate that such a system can retain and present informative rules pertaining to protein crystallization that warrant further confirmation via experimental techniques.
引用
收藏
页码:1705 / 1716
页数:12
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