Fluorescence enhancement of oligodeoxynucleotides modified with green fluorescent protein chromophore mimics upon triplex formation

被引:18
|
作者
Kanamori, Takashi [1 ]
Takamura, Akihiro [1 ]
Tago, Nobuhiro [1 ]
Masaki, Yoshiaki [1 ]
Ohkubo, Akihiro [1 ]
Sekine, Mitsuo [1 ]
Seio, Kohji [1 ]
机构
[1] Tokyo Inst Technol, Dept Life Sci, Midori Ku, 4259 Nagatsuta Cho, Yokohama, Kanagawa 2268501, Japan
关键词
PEPTIDE NUCLEIC-ACIDS; NUCLEOSIDE ANALOGS; MOLECULAR BEACONS; GFP CHROMOPHORE; DNA LABELS; BASE; PROBES; 2-AMINOPURINE; RECOGNITION; OLIGONUCLEOTIDES;
D O I
10.1039/c6ob01278g
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Green fluorescent protein (GFP)-based molecular-rotor chromophores were attached to the 5-positions of deoxyuridines, and subsequently, incorporated into the middle positions of oligodeoxynucleotides. These oligonucleotides were designed to form triplex DNA in order to encapsulate the GFP chromophores, mimicking GFP structures. Upon triplex formation, the embedded GFP chromophores exhibited fluorescence enhancement, suggesting the potential application of these fluorescent probes for the detection of nucleic acids.
引用
收藏
页码:1190 / 1197
页数:8
相关论文
共 50 条
  • [21] A role for molecular compression in the post-translational formation of the Green Fluorescent Protein chromophore
    Terranova, U.
    Nifosi, R.
    CHEMICAL PHYSICS, 2010, 371 (1-3) : 76 - 83
  • [22] Slow exchange in the chromophore of a green fluorescent protein variant
    Seifert, MH
    Ksiazek, D
    Azim, MK
    Smialowski, P
    Budisa, N
    Holak, TA
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (27) : 7932 - 7942
  • [23] Aequorea green fluorescent protein: Structural elucidation of the chromophore
    Niwa, H
    Matsuno, T
    Kojima, S
    Kubota, M
    Hirano, T
    Ohashi, M
    Inouye, S
    Ohmiya, Y
    Tsuji, FI
    BIOLUMINESCENCE AND CHEMILUMINESCENCE: MOLECULAR REPORTING WITH PHOTONS, 1997, : 395 - 398
  • [24] Green fluorescent protein: structure, folding and chromophore maturation
    Craggs, Timothy D.
    CHEMICAL SOCIETY REVIEWS, 2009, 38 (10) : 2865 - 2875
  • [25] Photophysics and chromophore cavity analysis of green fluorescent protein
    Baffour-Awuah, NY
    Maddalo, S
    Zimmer, M
    FEBS JOURNAL, 2005, 272 : 22 - 22
  • [26] Photoisomerization of green fluorescent protein and the dimensions of the chromophore cavity
    Chen, MC
    Lambert, CR
    Urgitis, JD
    Zimmer, M
    CHEMICAL PHYSICS, 2001, 270 (01) : 157 - 164
  • [27] Concerning the Thermal Diastereomerization of the Green Fluorescent Protein Chromophore
    Beate Hager
    Bettina Schwarzinger
    Heinz Falk
    Monatshefte für Chemie / Chemical Monthly, 2006, 137 : 163 - 168
  • [28] Nonadiabatic dynamics of the green fluorescent protein chromophore.
    Toniolo, A
    Ben-Nun, M
    Martinez, TJ
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2001, 222 : U234 - U234
  • [29] On photoabsorption of the neutral form of the green fluorescent protein chromophore
    Topol, Igor
    Collins, Jack
    Polyakov, Igor
    Grigorenko, Bella
    Nemukhin, Alexander
    BIOPHYSICAL CHEMISTRY, 2009, 145 (01) : 1 - 6
  • [30] Reaction progress of chromophore biogenesis in green fluorescent protein
    Zhang, LP
    Patel, HN
    Lappe, JW
    Wachter, RM
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (14) : 4766 - 4772