Single-cell sequencing from formalin-fixed paraffin-embedded breast cancers: a powerful tool to address intratumor genetic heterogeneity

被引:0
|
作者
Martelotto, Luciano G. [1 ]
Sakr, Rita A. [1 ]
Baslan, Timour [2 ]
Rodgers, Linda [2 ]
Cox, Hilary [2 ]
Kendall, Jude [2 ]
King, Tani A. [1 ]
Weigelt, Britta [1 ]
Hicks, James [2 ]
Reis-Filho, Jorge S. [1 ]
机构
[1] Mem Sloan Kettering Canc Ctr, New York, NY 10021 USA
[2] Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
关键词
D O I
10.1158/1538-7445.AM2015-4735
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
4735
引用
收藏
页数:1
相关论文
共 50 条
  • [41] The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues
    Michal Marczyk
    Chunxiao Fu
    Rosanna Lau
    Lili Du
    Alexander J. Trevarton
    Bruno V. Sinn
    Rebekah E. Gould
    Lajos Pusztai
    Christos Hatzis
    W. Fraser Symmans
    BMC Cancer, 19
  • [42] Chromosomal Junction Detection from Whole-Genome Sequencing on Formalin-Fixed, Paraffin-Embedded Tumors
    Murphy, Stephen
    Smadbeck, James
    Eckloff, Bruce
    Lee, Yean
    Johnson, Sarah
    Karagouga, Giannoula
    Serla, Vishnu
    Sharma, Anurag
    Sikkink, Robert
    Voss, Jesse
    Harris, Faye
    Kline, Janet Schaefer
    Kosari, Farhad
    Feldman, Andrew
    Wieben, Eric
    Aubry, Marie Christine
    Kipp, Benjamin
    Jen, Jin
    Cheville, John
    Vasmatzis, George
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2021, 23 (04): : 375 - 388
  • [43] The impact of RNA extraction method on accurate RNA sequencing from formalin-fixed paraffin-embedded tissues
    Marczyk, Michal
    Fu, Chunxiao
    Lau, Rosanna
    Du, Lili
    Trevarton, Alexander J.
    Sinn, Bruno V.
    Gould, Rebekah E.
    Pusztai, Lajos
    Hatzis, Christos
    Symmans, W. Fraser
    BMC CANCER, 2019, 19 (01)
  • [44] Targeted whole-viral genome sequencing from formalin-fixed paraffin-embedded neuropathology specimens
    Gorissen, Charlotte
    Albers, Anne
    Ruf, Viktoria
    Chteinberg, Emil
    Siebert, Reiner
    Schweizer, Leonille
    Kaufmann, Lukas
    Kuehn, Joachim E.
    Tappe, Dennis
    Kuhlmann, Tanja
    Thomas, Christian
    ACTA NEUROPATHOLOGICA, 2024, 148 (01)
  • [45] The quality of DNA isolated from autopsy formalin-fixed and formalin-fixed paraffin-embedded tissues: study of 1662 samples
    Katarina Vitošević
    Danijela Todorović
    Živana Slović
    Tatjana Varljen
    Ivana Radaković
    Dušan Radojević
    Vanja Čanović
    Miloš Todorović
    Molecular Biology Reports, 2023, 50 : 6323 - 6336
  • [46] Reliable Next-Generation Sequencing of Formalin-Fixed, Paraffin-Embedded Tissue Using Single Molecule Tags
    Eijkelenboom, Astrid
    Kamping, Eveline J.
    Kastner-van Raaij, Annemiek W.
    Hendriks-Cornelissen, Sandra J.
    Neveling, Kornelia
    Kuiper, Roland P.
    Hoischen, Alexander
    Nelen, Marcel R.
    Ligtenberg, Marjolijn J. L.
    Tops, Bastiaan B. J.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2016, 18 (06): : 851 - 863
  • [47] The quality of DNA isolated from autopsy formalin-fixed and formalin-fixed paraffin-embedded tissues: study of 1662 samples
    Vitosevic, Katarina
    Todorovic, Danijela
    Slovic, Zivana
    Varljen, Tatjana
    Radakovic, Ivana
    Radojevic, Dusan
    Canovic, Vanja
    Todorovic, Milos
    MOLECULAR BIOLOGY REPORTS, 2023, 50 (08) : 6323 - 6336
  • [48] Downstream applications of purified cell populations isolated from formalin-fixed paraffin-embedded tissue
    Zahnd, S.
    Zlobec, I.
    Sokol, L.
    VIRCHOWS ARCHIV, 2017, 471 : S191 - S192
  • [49] Protocol for PTEN Expression by Immunohistochemistry in Formalin-fixed Paraffin-embedded Human Breast Carcinoma
    Sakr, Rita A.
    Barbashina, Violetta
    Morrogh, Mary
    Chandarlapaty, Sarat
    Andrade, Victor P.
    Arroyo, Crispinita D.
    Olvera, Narciso
    King, Tari A.
    APPLIED IMMUNOHISTOCHEMISTRY & MOLECULAR MORPHOLOGY, 2010, 18 (04) : 371 - 374
  • [50] Targeted Next Generation Resequencing from Formalin-Fixed Paraffin-Embedded Tissue
    Duncavage, E. J.
    Armstrong, J.
    Magrini, V.
    Zehnbauer, B. A.
    Pfeifer, J. D.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2009, 11 (06): : 668 - 669