Supplementary data for genome-wide DNA methylation and gene expression analysis of PBMCs in patients with metabolic syndrome

被引:0
|
作者
Baek, Su-Jin [1 ]
Lee, Siwoo [1 ]
Jin, Hee-Jeong [1 ]
机构
[1] Korea Inst Oriental Med, KM Data Div, 1672 Yuseong Daero, Daejeon 34054, South Korea
来源
DATA IN BRIEF | 2022年 / 42卷
关键词
Biomarker; Multi-omics; Epigenome; Transcriptome; Correlation; RNA-SEQ EXPERIMENTS;
D O I
10.1016/j.dib.2022.108183
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This supplementary data supports the research article 'Genome-wide DNA methylation profiling reveals candidate biomarkers and probable molecular mechanism of metabolic syndrome' (Baek et al., in press). To obtain these data, 32 participants with metabolic syndrome (MetS) were enrolled in the associated study. We collected peripheral blood mononuclear cells (PBMCs) from 11 patients with MetS and nine controls and compared genome-wide gene expression and DNA methylation signatures. The remaining 12 participants were used for the experimental validation of the candidate groups. We provide the raw, analyzed, and filtered genomewide DNA methylation data, obtained using the Infinium Human MethylationEPIC BeadChIP array, and whole transcriptome sequencing data (accession number GSE181647). We list the differentially expressed and differentially methylated genes and their biological functions. These data can serve as a basis for screening appropriate epigenetic biomarkers for MetS. (C) 2022TheAuthor(s). PublishedbyElsevierInc.
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页数:5
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