StarDOM: From STAR format to XML

被引：1
|
作者：
Linge, JP [1 ]
Nilges, M [1 ]
Ehrlich, L [1 ]
机构：
[1] European Mol Biol Lab, D-69012 Heidelberg, Germany
来源：
JOURNAL OF BIOMOLECULAR NMR | 1999年 / 15卷 / 02期
关键词：
BioMagResBank; document object model; mmCIF; STAR; XML;
D O I：
10.1023/A:1008347330165
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
StarDOM is a software package for the representation of STAR files as document object models and the conversion of STAR files into XML. This allows interactive navigation by using the Document Object Model representation of the data as well as easy access by XML query languages. As an example application, the entire BioMagResBank has been transformed into XML format. Using an XML query language, statistical queries on the collected NMR data sets can be constructed with very little effort. The BioMagResBank/XML data and the software can be obtained at http://www.nmr.embl-heidelberg.de/nmr/StarDOM/.
引用
收藏
页码：169 / 172
页数：4
相关论文
共 50 条
  • [41] Secure emails in XML format using Web Services
    Liao, Lijun
    Schwenk, Joerg
    ECOWS 07: PROCEEDING OF THE 5TH IEEE EUROPEAN CONFERENCE ON WEB SERVICES, 2007, : 129 - +
  • [42] Use XML Format like a Model of Data Backup
    Oumtanaga, Souleymane
    Lambert, Kadjo Tanon
    Tiemoman, Kone
    Pierre, Tety
    Florent, Dowa N'sreke
    PROCEEDINGS OF WORLD ACADEMY OF SCIENCE, ENGINEERING AND TECHNOLOGY, VOL 22, 2007, 22 : 408 - +
  • [43] BSBC:: Towards a succinct data format for XML streams
    Boettcher, Stefan
    Hartel, Rita
    Heinzemann, Christian
    WEBIST 2008: PROCEEDINGS OF THE FOURTH INTERNATIONAL CONFERENCE ON WEB INFORMATION SYSTEMS AND TECHNOLOGIES, VOL 1, 2008, : 13 - 21
  • [44] TCML - An XML-Based Test Case Format
    Jaafar, Mohd Farid
    Selamat, Mohd Hasan
    Ghani, Abdul Azim Abdul
    2006 INTERNATIONAL CONFERENCE ON COMPUTING & INFORMATICS (ICOCI 2006), 2006, : 219 - +
  • [45] Development of a Digital Textbook Standard Format Based on XML
    Kim, Mihye
    Yoo, Kwan-Hee
    Park, Chan
    Yoo, Jae-Soo
    ADVANCES IN COMPUTER SCIENCE AND INFORMATION TECHNOLOGY, PROCEEDINGS, 2010, 6059 : 363 - +
  • [46] Transforming paper documents into XML format with WISDOM++
    Altamura O.
    Esposito F.
    Malerba D.
    International Journal on Document Analysis and Recognition, 2001, 4 (1) : 2 - 17
  • [47] A system for converting PDF documents into structured XML format
    Déjean, H
    Meunier, JL
    DOCUMENT ANALYSIS SYSTEMS VII, PROCEEDINGS, 2006, 3872 : 129 - 140
  • [48] Archiving of care related information in XML-format
    Olhede, T
    Peterson, HE
    MEDICAL INFOBAHN FOR EUROPE, PROCEEDINGS, 2000, 77 : 642 - 646
  • [49] An XML file format for exchanging singlet lens specifications
    Gay, Shawn C.
    Gangadhara, Sanjay
    OPTIFAB 2015, 2015, 9633
  • [50] USING XML LANGUAGE FOR INFORMATION REPRESENTATION IN DIGITAL FORMAT
    Bina, George Cristian
    PROCEEDINGS OF THE 10TH INTERNATIONAL CONFERENCE 'LINQUISTIC RESOURCES AND TOOLS FOR PROCESSING THE ROMANIAN LANGUAGE', 2014, 2014, : 29 - 29
12345