Enhanced throughput for DNA sequencing by capillary array electrophoresis with a gradient of electric field strength

被引:5
|
作者
Yoshida, C [1 ]
Endo, Y [1 ]
Baba, Y [1 ]
机构
[1] Univ Tokushima, Fac Pharmaceut Sci, Dept Med Chem, Tokushima 7708505, Japan
关键词
DNA sequencing; SNPs; gradient of electric field strength; capillary temperature;
D O I
10.1016/S0928-0987(00)00213-X
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The effect of electric field gradients are examined on the speed, selectivity, read length, and accuracy for DNA sequencing using capillary array electrophoresis. Modified electric field gradients was realized to read over 800 bases within 140 min. The method developed is effectively applicable to single nucleotide polymorphism analysis for genomic drug discovery and pharmacogenomics. (C) 2001 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:99 / 103
页数:5
相关论文
共 50 条
  • [1] DNA sequencing by capillary array electrophoresis with an electric field strength gradient
    Endo, Y
    Yoshida, C
    Baba, Y
    [J]. JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS, 1999, 41 (2-3): : 133 - 141
  • [2] Enhanced separation of DNA sequencing products by capillary electrophoresis using a stepwise gradient of electric field strength
    Inoue, H
    Tsuhako, M
    Baba, Y
    [J]. JOURNAL OF CHROMATOGRAPHY A, 1998, 802 (01) : 179 - 184
  • [3] High-throughput DNA sequencing on a capillary array electrophoresis system
    Marsh, M
    Tu, O
    Dolnik, V
    Roach, D
    Solomon, N
    Bechtol, K
    Smietana, P
    Wang, LP
    Li, XD
    Cartwright, P
    Marks, A
    Barker, D
    Harris, D
    Bashkin, J
    [J]. JOURNAL OF CAPILLARY ELECTROPHORESIS, 1997, 4 (02) : 83 - 89
  • [4] OPTIMIZATION OF ELECTRIC-FIELD STRENGTH FOR DNA-SEQUENCING IN CAPILLARY GEL-ELECTROPHORESIS
    LUCKEY, JA
    SMITH, LM
    [J]. ANALYTICAL CHEMISTRY, 1993, 65 (20) : 2841 - 2850
  • [5] Capillary array electrophoresis DNA sequencing.
    Kheterpal, I
    Mathies, RA
    [J]. ANALYTICAL CHEMISTRY, 1999, 71 (01) : 31A - 37A
  • [6] DNA SEQUENCING USING CAPILLARY ARRAY ELECTROPHORESIS
    HUANG, XHC
    QUESADA, MA
    MATHIES, RA
    [J]. ANALYTICAL CHEMISTRY, 1992, 64 (18) : 2149 - 2154
  • [7] DNA sequencing by capillary array electrophoresis and microfabricated array systems
    Carrilho, E
    [J]. ELECTROPHORESIS, 2000, 21 (01) : 55 - 65
  • [8] CAPILLARY ARRAY ELECTROPHORESIS - AN APPROACH TO HIGH-SPEED, HIGH-THROUGHPUT DNA SEQUENCING
    MATHIES, RA
    HUANG, XC
    [J]. NATURE, 1992, 359 (6391) : 167 - 169
  • [9] High throughput DNA sequencing with a microfabricated 96-lane capillary array electrophoresis bioprocessor
    Paegel, BM
    Emrich, CA
    Wedemayer, GJ
    Scherer, JR
    Mathies, RA
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (02) : 574 - 579
  • [10] High throughput DNA genotyping on capillary array electrophoresis chips
    Simpson, P
    Woolley, A
    Thorsen, T
    Sensabaugh, GF
    Mathies, RA
    [J]. PROGRESS IN FORENSIC GENETICS 7, 1998, 1167 : 3 - 5