The Applications of Single-Cell RNA Sequencing in Atherosclerotic Disease

被引:15
|
作者
Slenders, Lotte [1 ]
Tessels, Danielle E. [1 ]
van der Laan, Sander W. [1 ]
Pasterkamp, Gerard [1 ]
Mokry, Michal [1 ,2 ]
机构
[1] Univ Utrecht, Univ Med Ctr Utrecht, Cent Diagnost Lab, Utrecht, Netherlands
[2] Univ Utrecht, Univ Med Ctr Utrecht, Dept Cardiol, Lab Expt Cardiol, Utrecht, Netherlands
来源
基金
欧盟地平线“2020”;
关键词
scRNA-sequencing; transcriptomics; -omics; single-cell; atherosclerosis; SMOOTH-MUSCLE-CELLS; GENE-EXPRESSION; TRANSCRIPTOME ANALYSIS; PLAQUE; CORONARY; REVEALS; MECHANISMS; PATHWAYS; TECHNOLOGY; LOCI;
D O I
10.3389/fcvm.2022.826103
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Atherosclerosis still is the primary cause of death worldwide. Our characterization of the atherosclerotic lesion is mainly rooted in definitions based on pathological descriptions. We often speak in absolutes regarding plaque phenotypes: vulnerable vs. stable plaques or plaque rupture vs. plaque erosion. By focusing on these concepts, we may have oversimplified the atherosclerotic disease and its mechanisms. The widely used definitions of pathology-based plaque phenotypes can be fine-tuned with observations made with various -omics techniques. Recent advancements in single-cell transcriptomics provide the opportunity to characterize the cellular composition of the atherosclerotic plaque. This additional layer of information facilitates the in-depth characterization of the atherosclerotic plaque. In this review, we discuss the impact that single-cell transcriptomics may exert on our current understanding of atherosclerosis.
引用
收藏
页数:12
相关论文
共 50 条
  • [31] Following hearts, one cell at a time: recent applications of single-cell RNA sequencing to the understanding of heart disease
    Matthew Ackers-Johnson
    Wilson Lek Wen Tan
    Roger Sik-Yin Foo
    Nature Communications, 9
  • [32] Following hearts, one cell at a time: recent applications of single-cell RNA sequencing to the understanding of heart disease
    Ackers-Johnson, Matthew
    Tan, Wilson Lek Wen
    Foo, Roger Sik-Yin
    NATURE COMMUNICATIONS, 2018, 9
  • [33] Applications of Single-Cell DNA Sequencing
    Evrony, Gilad D.
    Hinch, Anjali Gupta
    Luo, Chongyuan
    ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 22, 2021, 2021, 22 : 171 - 197
  • [34] Applications of Single-Cell Sequencing in Dermatology
    Zou, Dandan
    Qi, Jue
    Wu, Wenjuan
    Xu, Dan
    Tu, Ying
    Liu, Tongyun
    Zhang, Juan
    Li, Xing
    Lu, Fengyan
    He, Li
    MEDICAL SCIENCE MONITOR, 2021, 27
  • [35] Probing infectious disease by single-cell RNA sequencing: Progresses and perspectives
    Luo, Geyang
    Gao, Qian
    Zhang, Shuye
    Yan, Bo
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2020, 18 : 2962 - 2971
  • [36] Single-Cell RNA Sequencing of T Cells in Crohn's Disease
    Du, Min
    Dong, Rui
    Zheng, Shan
    GASTROENTEROLOGY, 2019, 157 (01) : 265 - 266
  • [37] Advancing skeletal health and disease research with single-cell RNA sequencing
    Lin, Peng
    Gan, Yi-Bo
    He, Jian
    Lin, Si-En
    Xu, Jian-Kun
    Chang, Liang
    Zhao, Li-Ming
    Zhu, Jun
    Zhang, Liang
    Huang, Sha
    Hu, Ou
    Wang, Ying-Bo
    Jin, Huai-Jian
    Li, Yang-Yang
    Yan, Pu-Lin
    Chen, Lin
    Jiang, Jian-Xin
    Liu, Peng
    MILITARY MEDICAL RESEARCH, 2024, 11 (01)
  • [38] Single-Cell RNA-Sequencing in Astrocyte Development, Heterogeneity, and Disease
    Meng-Yuan Gao
    Jia-Qi Wang
    Jin He
    Rui Gao
    Yuan Zhang
    Xing Li
    Cellular and Molecular Neurobiology, 2023, 43 : 3449 - 3464
  • [39] Single-cell RNA sequencing in diabetic kidney disease: a literature review
    Tan, Wei
    Chen, Jiaoyan
    Wang, Yunyan
    Xiang, Kui
    Lu, Xianqiong
    Han, Qiuyu
    Hou, Mingyue
    Yang, Jurong
    RENAL FAILURE, 2024, 46 (02)
  • [40] An overview of human single-cell RNA sequencing studies in neurobiological disease
    Walter, T. Jordan
    Suter, Robert K.
    Ayad, Nagi G.
    NEUROBIOLOGY OF DISEASE, 2023, 184