Crystallization and preliminary X-ray crystallographic studies of the PYD domain of human NALP3

被引:6
|
作者
Bae, Ju Young
Park, Hyun Ho [1 ]
机构
[1] Yeungnam Univ, Sch Biotechnol, Gyongsan, South Korea
基金
新加坡国家研究基金会;
关键词
PYRIN DOMAIN; PROTEIN; INFLAMMATION; CASPASE-1; APOPTOSIS; CRYSTALS; ACTIVATE;
D O I
10.1107/S1744309111035937
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The NALP3 inflammasome is a macromolecular complex that is responsible for the innate immune response against infection by bacterial and viral pathogens. The NALP3 inflammasome is composed of three protein components: NALP3, ASC and caspase 1. Interaction between NALP3 and ASC via PYD domains is critical for the assembly of the NALP3 inflammasome. In this study, human NALP3 PYD, corresponding to amino acids 3-110, was overexpressed in Escherichia coli using engineered C-terminal His tags. NALP3 PYD was then purified to homogeneity and crystallized at 293 K. Finally, X-ray diffraction data were collected to a resolution of 1.7 angstrom from a crystal belonging to the primitive monoclinic space group P2(1), with unit-cell parameters a = 42.03, b = 60.14, c = 51.61 angstrom, beta = 107.40 degrees.
引用
收藏
页码:1421 / 1424
页数:4
相关论文
共 50 条
  • [1] Crystallization and preliminary X-ray crystallographic studies of human cyclophilin
    Hu, H
    Huang, CQ
    Liu, HL
    Han, Y
    Yu, L
    Bi, RC
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2005, 61 : 216 - 218
  • [2] Crystallization and preliminary X-ray crystallographic studies of the axin DIX domain
    Shibata, Naoki
    Tomimoto, Yusuke
    Hanamura, Toru
    Yamamoto, Ryo
    Ueda, Mai
    Ueda, Yasufumi
    Mizuno, Nobuhiro
    Ogata, Hideaki
    Komori, Hirofumi
    Shomura, Yasuhito
    Kataoka, Michihiko
    Shimizu, Sakayu
    Kondo, Jun
    Yamamoto, Hideki
    Kikuchi, Akira
    Higuchi, Yoshiki
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2007, 63 : 529 - 531
  • [3] Crystallization and preliminary X-ray crystallographic studies of the CARD domain of human CARMA1
    Park, Jin Hee
    Park, Hyun Ho
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 435 - 437
  • [4] Crystallization and preliminary X-ray crystallographic studies of human FAIM protein
    Gu, Jiang
    Ji, Xiaowei
    Qi, Jianxun
    Ma, Ying
    Mao, Xuhu
    Zou, Quanming
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2010, 66 : 929 - 931
  • [5] Crystallization and preliminary X-ray crystallographic studies of the CIDE-N domain of CIDE-3
    Lee, Seung Mi
    Park, Hyun Ho
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 1260 - 1263
  • [6] Crystallization and preliminary X-ray crystallographic studies of the coiled-coil domain of PIST
    Shin, Young-Cheul
    Seo, Eun Kyoung
    Jeon, Ju-Hong
    Park, Hyun Ho
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 468 - 471
  • [7] Crystallization and preliminary X-ray crystallographic studies of human autocrine motility factor
    Uemura, H
    Tanaka, N
    Funasaka, T
    Haga, A
    Nagase, H
    Raz, A
    Nakamura, KT
    [J]. PROTEIN AND PEPTIDE LETTERS, 2001, 8 (04): : 317 - 322
  • [8] Crystallization and preliminary X-ray crystallographic studies on recombinant human carnitine acetyltransferase
    Lian, W
    Govindasamy, L
    Gu, YR
    Kukar, T
    Agbandje-McKenna, M
    McKenna, R
    Wu, DH
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2002, 58 : 1193 - 1194
  • [9] Crystallization and preliminary X-ray crystallographic studies of human 2′,3′-cyclic nucleotide 3′-phosphodiesterase
    Sakamoto, Y
    Tanaka, N
    Ichimiya, T
    Kurihara, T
    Nakamura, KT
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 2095 - 2097
  • [10] Crystallization and preliminary X-ray crystallographic analysis of the catalytic domain of human dihydrouridine synthase
    Griffiths, Sam
    Byrne, Robert T.
    Antson, Alfred A.
    Whelan, Fiona
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2012, 68 : 333 - 336