The A, C, G, and T of Genome Assembly

被引：7
|
作者：
Wajid, Bilal [1 ]
Sohail, Muhammad U. [2 ]
Ekti, Ali R. [3 ]
Serpedin, Erchin [4 ]
机构：
[1] Univ Engn & Technol, Dept EE, Lahore 54890, Punjab, Pakistan
[2] Govt Coll Univ, Dept Physiol, Faisalabad 38000, Punjab, Pakistan
[3] Gannon Univ, Dept ECE, Erie, PA 16501 USA
[4] Texas A&M Univ, Dept ECE, College Stn, TX 77840 USA
来源：
BIOMED RESEARCH INTERNATIONAL | 2016年 / 2016卷
关键词：
SHORT DNA-SEQUENCES; ERROR-CORRECTION; QUALITY-CONTROL; ALGORITHM; ACCURACY; MILLIONS; IMPROVE; ADAPTER; VELVET; VIEWER;
D O I：
10.1155/2016/6329217
中图分类号：
Q81 [生物工程学（生物技术）]; Q93 [微生物学];
学科分类号：
071005 ; 0836 ; 090102 ; 100705 ;
摘要：
Genome assembly in its two decades of history has produced significant research, in terms of both biotechnology and computational biology. This contribution delineates sequencing platforms and their characteristics, examines key steps involved in filtering and processing raw data, explains assembly frameworks, and discusses quality statistics for the assessment of the assembled sequence. Furthermore, the paper explores recent Ubuntu-based software environments oriented towards genome assembly as well as some avenues for future research.
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收藏
页数：10
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