Genetic diversity and population structure of the Korean field mouse(Apodumus peninsulae) in South Korea: from 17 previously and newly developed microsatellite markers

被引:1
|
作者
Eo, Soo Hyung [2 ,3 ]
Rhim, Shin-Jae [1 ]
Lee, Woo-Shin [4 ]
Carroll, John P. [2 ]
机构
[1] Chung Ang Univ, Sch Bioresource & Biosci, Ansung 456756, South Korea
[2] Univ Georgia, Warnell Sch Forestry & Nat Resources, Athens, GA 30602 USA
[3] Purdue Univ, Dept Forestry & Nat Resources, W Lafayette, IN 47907 USA
[4] Seoul Natl Univ, Dept Forest Sci, Seoul 151921, South Korea
关键词
Apodemus peninsulae; Gene flow; Genetic structure; Marker development; Taebaek mountain ranges; APODEMUS-PENINSULAE; AMPLIFICATION; HANTAVIRUS; EVOLUTION; VIRUS;
D O I
10.1007/s13258-010-0123-5
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
To provide more reliable genetic information on species and minimize experimental errors, biologists increase the number of genetic markers available and then carefully select optimal markers from a large candidate pool. We developed nine novel microsatellite markers from the Korean field mouse (Apodemus peninsulae), which is one of the most dominant forest animals in South Korea. The mean observed and expected heterozygosities across nine markers were 0.65 and 0.73, respectively, with an average polymorphic information content of 0.70. Using 17 microsatellite markers (nine polymorphic markers in this study, in combination with eight previously reported for the species), we conducted genetic analysis on the animals from six sampling locations. These locations are divided into the eastern (EAST) and the western (WEST) sides of the Taebaek mountain ranges in South Korea. Genetic diversity was high at both groups, with the mean expected heterozygosity of 0.77 in EAST and 0.78 in WEST. However, we did not observe strong evidence of genetic divergence between two groups. Future genetic research with more samples incorporating ecological study may clarify population structure in the species and the hypothesis of the mountains discontinuity of gene flow.
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页码:445 / 449
页数:5
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