A Coarse-to-Fine Framework for Automated Knee Bone and Cartilage Segmentation Data from the Osteoarthritis Initiative

被引:6
|
作者
Deng, Yang [1 ]
You, Lei [1 ]
Wang, Yanfei [1 ]
Zhou, Xiaobo [1 ]
机构
[1] Univ Texas Hlth Sci Ctr Houston, Sch Biomed Informat, Houston, TX 77030 USA
基金
美国国家卫生研究院;
关键词
Knee osteoarthritis; Medical image segmentation; Coarse-to-fine; UNet  ++  PREVALENCE; EFFICIENT; MRI;
D O I
10.1007/s10278-021-00464-z
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Knee osteoarthritis (OA) is a degenerative joint disease that is prevalent in advancing age. The pathology of OA disease is still unclear, and there are no effective interventions that can completely alter the OA disease process. Magnetic resonance (MR) image evaluation is sensitive for depicting early changes of knee OA, and therefore important for early clinical intervention for relieving the symptom. Automated cartilage segmentation based on MR images is a vital step in experimental longitudinal studies to follow-up the patients and prospectively define a new quantitative marker from OA progression. In this paper, we develop a deep learning-based coarse-to-fine approach for automated knee bone, cartilage, and meniscus segmentation with high computational efficiency. The proposed method is evaluated using two-fold cross-validation on 507 MR volumes (81,120 slices) with OA from the Osteoarthritis Initiative (OAI)(1) dataset. The mean dice similarity coefficients (DSCs) of femoral bone (FB), tibial bone (TB), femoral cartilage (FC), and tibial cartilage (TC) separately are 99.1%, 98.2%, 90.9%, and 85.8%. The time of segmenting each patient is 12 s, which is fast enough to be used in clinical practice. Our proposed approach may provide an automated toolkit to help computer-aided quantitative analyses of OA images.
引用
收藏
页码:833 / 840
页数:8
相关论文
共 50 条
  • [1] A Coarse-to-Fine Framework for Automated Knee Bone and Cartilage Segmentation Data from the Osteoarthritis Initiative
    Yang Deng
    Lei You
    Yanfei Wang
    Xiaobo Zhou
    [J]. Journal of Digital Imaging, 2021, 34 : 833 - 840
  • [2] Automated segmentation of knee bone and cartilage combining statistical shape knowledge and convolutional neural networks: Data from the Osteoarthritis Initiative
    Ambellan, Felix
    Tack, Alexander
    Ehlke, Moritz
    Zachow, Stefan
    [J]. MEDICAL IMAGE ANALYSIS, 2019, 52 : 109 - 118
  • [3] Fully automated subchondral bone segmentation from knee MR images: Data from the Osteoarthritis Initiative
    Gandhamal, Akash
    Talbar, Sanjay
    Gajre, Suhas
    Razak, Ruslan
    Hani, Ahmad Fadzil M.
    Kumar, Dileep
    [J]. COMPUTERS IN BIOLOGY AND MEDICINE, 2017, 88 : 110 - 125
  • [4] Analysis of Parameters' Effects in Semi-Automated Knee Cartilage Segmentation Model: Data from the Osteoarthritis Initiative
    Gan, Hong-Seng
    Karim, Ahmad Helmy Abdul
    Sayuti, Khairil Amir
    Tan, Tian-Swee
    Kadir, Mohammed Rafiq Abdul
    [J]. INTERNATIONAL CONFERENCE ON MATHEMATICS, ENGINEERING AND INDUSTRIAL APPLICATIONS 2016 (ICOMEIA2016), 2016, 1775
  • [5] Automatic Bone Segmentation in Knee MR images using a Coarse-to-Fine Strategy
    Park, Sang Hyun
    Lee, Soochahn
    Yun, Il Dong
    Lee, Sang Uk
    [J]. MEDICAL IMAGING 2012: IMAGE PROCESSING, 2012, 8314
  • [6] Unifying the seeds auto-generation (SAGE) with knee cartilage segmentation framework: data from the osteoarthritis initiative
    Gan, Hong-Seng
    Sayuti, Khairil Amir
    Ramlee, Muhammad Hanif
    Lee, Yeng-Seng
    Mahmud, Wan Mahani Hafizah Wan
    Karim, Ahmad Helmy Abdul
    [J]. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 2019, 14 (05) : 755 - 762
  • [7] Unifying the seeds auto-generation (SAGE) with knee cartilage segmentation framework: data from the osteoarthritis initiative
    Hong-Seng Gan
    Khairil Amir Sayuti
    Muhammad Hanif Ramlee
    Yeng-Seng Lee
    Wan Mahani Hafizah Wan Mahmud
    Ahmad Helmy Abdul Karim
    [J]. International Journal of Computer Assisted Radiology and Surgery, 2019, 14 : 755 - 762
  • [8] An Efficiency Coarse-to-Fine Segmentation Framework for Abdominal Organs Segmentation
    Chen, Cancan
    Xu, Weixin
    Zhang, Rongguo
    [J]. FAST AND LOW-RESOURCE SEMI-SUPERVISED ABDOMINAL ORGAN SEGMENTATION, FLARE 2022, 2022, 13816 : 47 - 55
  • [9] Multilabel Graph based Approach for Knee Cartilage Segmentation: Data from the Osteoarthritis Initiative
    Gan, Hong-Seng
    Tan, Tian-Swee
    Sayuti, Khairil Amir
    Karim, Ahmad Helmy Abdul
    Kadir, Mohammed Rafiq Abdul
    [J]. 2014 IEEE CONFERENCE ON BIOMEDICAL ENGINEERING AND SCIENCES (IECBES), 2014, : 210 - 213
  • [10] Automated Ehexahedral meshing of knee cartilage structures - application to data from the osteoarthritis initiative
    Rodriguez-Vila, B.
    Sanchez-Gonzalez, P.
    Oropesa, I.
    Gomez, E. J.
    Pierce, D. M.
    [J]. COMPUTER METHODS IN BIOMECHANICS AND BIOMEDICAL ENGINEERING, 2017, 20 (14) : 1543 - 1553