Insights from ab initio quantum chemical calculations into the preferred tautomeric forms and binding affinities to CDK2 of substituted pyrazolopyridines

被引:7
|
作者
Duca, JS [1 ]
Madison, VS [1 ]
机构
[1] Schering Plough Res Inst, Dept Struct Chem, Kenilworth, NJ 07033 USA
关键词
ab initio calculations; pyrazolopyridines; free energy; basicity; binding affinity; CDK2; hydrogen-bond strength;
D O I
10.1002/bip.20218
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ab initio calculations were employed to compute pKa values and tautomer properties of a series of substituted pyrazolopyridines. The results show that the neutral 1H tautomer predominates, but upon protonation this proton migrates to give the preferred charged [2H, 7H] tautoiner. The basicity of the pyrazolopyridines is correlated with the electron donating capability, of the 4-substituent. Ab initio free energy calculations were also used to identify determinants of binding affinity,for some recently published pyrazolopyridine inhibitors ofCDK2. Hydrogen-bonding affinity. may be one important component of binding strength. (c) 2005 Wiley Periodicals, Inc.
引用
收藏
页码:312 / 318
页数:7
相关论文
共 50 条
  • [31] IR Spectra of Ethane Adsorbed on the Hydrogen, Sodium, and Zinc Forms of a Y-Type Zeolite: Interpretation Using ab initio Quantum Chemical Calculations
    E. A. Pidko
    V. B. Kazanskii
    Kinetics and Catalysis, 2005, 46 : 407 - 413
  • [32] IR spectra of ethane adsorbed on the hydrogen, sodium, and zinc forms of a Y-type zeolite:: Interpretation using ab initio quantum chemical calculations
    Pidko, EA
    Kazanskii, VB
    KINETICS AND CATALYSIS, 2005, 46 (03) : 407 - 413
  • [33] Insights into the Structural Basis of N2 and O6 Substituted Guanine Derivatives as Cyclin-Dependent Kinase 2 (CDK2) Inhibitors: Prediction of the Binding Modes and Potency of the inhibitors by Docking and ONIOM Calculations
    Alzate-Morales, Jans H.
    Caballero, Julio
    Vergara Jague, Ariela
    Gonzalez Nilo, Fernando D.
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2009, 49 (04) : 886 - 899
  • [34] Quantum-Chemical ab initio Calculations on the Three Isomers of Diborabenzene (C4H4B2)
    Singh, Jaswinder
    Wang, Yuekui
    Raabe, Gerhard
    ZEITSCHRIFT FUR NATURFORSCHUNG SECTION A-A JOURNAL OF PHYSICAL SCIENCES, 2010, 65 (1-2): : 113 - 122
  • [35] Electronic structure of an oxygen vacancy in Al2O3 from the results of Ab Initio quantum-chemical calculations and photoluminescence experiments
    V. A. Pustovarov
    V. Sh. Aliev
    T. V. Perevalov
    V. A. Gritsenko
    A. P. Eliseev
    Journal of Experimental and Theoretical Physics, 2010, 111 : 989 - 995
  • [36] Electronic structure of an oxygen vacancy in Al2O3 from the results of Ab Initio quantum-chemical calculations and photoluminescence experiments
    Pustovarov, V. A.
    Aliev, V. Sh.
    Perevalov, T. V.
    Gritsenko, V. A.
    Eliseev, A. P.
    JOURNAL OF EXPERIMENTAL AND THEORETICAL PHYSICS, 2010, 111 (06) : 989 - 995
  • [37] Mechanism of Magnetostructural Transitions in Copper-Nitroxide-Based Switchable Molecular Magnets: Insights from ab Initio Quantum Chemistry Calculations
    Jung, Julie
    Le Guennic, Boris
    Fedin, Matvey V.
    Ovcharenko, Victor I.
    Calzado, Carmen J.
    INORGANIC CHEMISTRY, 2015, 54 (14) : 6891 - 6899
  • [38] The Ti0(2)(100)(1x3) reconstruction: Insights from ab initio calculations
    Lindan, PJD
    Harrison, NM
    Holender, JM
    Gillan, MJ
    Payne, MC
    SURFACE SCIENCE, 1996, 364 (03) : 431 - 438
  • [39] Thermophysical properties of the novel 2D materials graphene and silicene: insights from ab-initio calculations
    Gori, Paola
    Pulci, Olivia
    Vollaro, Roberto de Lieto
    Guattari, Claudia
    ATI 2013 - 68TH CONFERENCE OF THE ITALIAN THERMAL MACHINES ENGINEERING ASSOCIATION, 2014, 45 : 512 - 517
  • [40] On the Origins of Core-Electron Chemical Shifts of Small Biomolecules in Aqueous Solution: Insights from Photoemission and ab Initio Calculations of Glycineaq
    Ottosson, Niklas
    Borve, Knut J.
    Spangberg, Daniel
    Bergersen, Henrik
    Saethre, Leif J.
    Faubel, Manfred
    Pokapanich, Wandared
    Ohrwall, Gunnar
    Bjorneholm, E.
    Winter, Bernd
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (09) : 3120 - 3130