Dynamic and complex Mycobacterium tuberculosis microevolution unrevealed by standard genotyping

被引:4
|
作者
Perez-Lago, Laura [1 ,2 ]
Herranz, Marta [1 ,2 ]
Bouza, Emilio [1 ,2 ]
Garcia de Viedma, Dario [1 ,2 ]
机构
[1] Univ Gregorio Maranon, Gen Hosp, Serv Microbiol & Enfermedades Infecciosas, Madrid 28007, Spain
[2] Inst Invest Sanitaria Gregorio Maranon, Madrid, Spain
关键词
Mycobacterium tuberculosis; Microevolution; Transmission cluster; Clonal variants; POLYMORPHISM; TRANSMISSION; STRAINS;
D O I
10.1016/j.tube.2012.01.003
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
We performed an in-depth analysis of a large Mycobacterium tuberculosis cluster involving nine isolates with identical or highly similar RFLP types. The strain involved in this transmission cluster microevolved and accumulated up to five differential IS6110 transposition events, several of them not revealed by standard genotyping approaches. Some of these events probably generated extended deletions. In two cases of tuberculosis within the cluster, we observed the simultaneous presence of both the reference and microevolved variants. A longitudinal genotypical survey of M. tuberculosis in a real clinical evolutionary scenario can reveal dynamic and complex microevolution events. (C) 2012 Elsevier Ltd. All rights reserved.
引用
收藏
页码:232 / 235
页数:4
相关论文
共 50 条
  • [21] Genotyping of Mycobacterium tuberculosis complex based on restriction enzyme analysis of the hsp65 gene
    Nwokoye, N. N.
    Nwaokorie, F. O.
    Iwalokun, B. A.
    Onubogu, C. C.
    Idigbe, E. O.
    [J]. AFRICAN JOURNAL OF MICROBIOLOGY RESEARCH, 2012, 6 (32): : 6199 - 6203
  • [22] Identification and Genotyping of Mycobacterium tuberculosis Complex Species by Use of a SNaPshot Minisequencing-Based Assay
    Bouakaze, C.
    Keyser, C.
    de Martino, S. J.
    Sougakoff, W.
    Veziris, N.
    Dabernat, H.
    Ludes, B.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (05) : 1758 - 1766
  • [23] Characterization of Microevolution Events in Mycobacterium tuberculosis Strains Involved in Recent Transmission Clusters
    Perez-Lago, Laura
    Herranz, Marta
    Martinez Lirola, Miguel
    Bouza, Emilio
    Garcia de Viedma, Dario
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (11) : 3771 - 3776
  • [24] Microevolution of the direct repeat region of Mycobacterium tuberculosis:: Implications for interpretation of spoligotyping data
    Warren, RM
    Streicher, EM
    Sampson, SL
    van der Spuy, GD
    Richardson, M
    Nguyen, D
    Behr, AA
    Victor, TC
    van Helden, PD
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2002, 40 (12) : 4457 - 4465
  • [25] Whole Genome Sequencing Analysis of Intrapatient Microevolution in Mycobacterium tuberculosis: Potential Impact on the Inference of Tuberculosis Transmission
    Perez-Lago, Laura
    Comas, Inaki
    Navarro, Yurena
    Gonzalez-Candelas, Fernando
    Herranz, Marta
    Bouza, Emilio
    Garcia-de-Viedma, Dario
    [J]. JOURNAL OF INFECTIOUS DISEASES, 2014, 209 (01): : 98 - 108
  • [26] Genotyping of Mycobacterium tuberculosis using whole genome sequencing
    Amlerova, Jana
    Bitar, Ibrahim
    Hrabak, Jaroslav
    [J]. FOLIA MICROBIOLOGICA, 2018, 63 (05) : 537 - 545
  • [27] Genotyping and virulence assessment of Mycobacterium tuberculosis strains in Indonesia
    Yanti, Budi
    Amin, Muhammad
    Mertaniasih, Ni Made
    Soetjipto, Soetjipto
    [J]. RESPIROLOGY, 2023, 28 : 50 - 51
  • [28] Molecular Epidemiology and Genotyping of Mycobacterium tuberculosis Isolated in Baghdad
    Ali, Ruqaya Mustafa
    Trovato, Alberto
    Couvin, David
    Al-Thwani, Amina N.
    Borroni, Emanuele
    Dhaer, Fahim H.
    Rastogi, Nalin
    Cirillo, Daniela M.
    [J]. BIOMED RESEARCH INTERNATIONAL, 2014, 2014
  • [29] Molecular Genotyping of Mycobacterium tuberculosis Isolates from Turkey
    Gencer, Berrin
    Shinnick, Thomas M.
    [J]. AMERICAN JOURNAL OF INFECTIOUS DISEASES, 2005, 1 (01) : 5 - 11
  • [30] Microevolution of the direct repeat locus of Mycobacterium tuberculosis in a strain prevalent in San Francisco
    Aga, RS
    Fair, E
    Abernethy, NF
    DeRiemer, K
    Paz, EA
    Kawamura, LM
    Small, PM
    Kato-Maeda, M
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2006, 44 (04) : 1558 - 1560