Hidden biodiversity revealed by DNA barcoding in black fly genus Simulium
被引:1
|
作者:
Zhang Ruiling
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机构:
Shandong First Med Univ, Collaborat Innovat Ctr Origin & Control Oemerging, Tai An 271016, Shandong, Peoples R ChinaShandong First Med Univ, Collaborat Innovat Ctr Origin & Control Oemerging, Tai An 271016, Shandong, Peoples R China
Zhang Ruiling
[1
]
Zhang Zhong
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机构:
Shandong First Med Univ, Collaborat Innovat Ctr Origin & Control Oemerging, Tai An 271016, Shandong, Peoples R ChinaShandong First Med Univ, Collaborat Innovat Ctr Origin & Control Oemerging, Tai An 271016, Shandong, Peoples R China
Zhang Zhong
[1
]
机构:
[1] Shandong First Med Univ, Collaborat Innovat Ctr Origin & Control Oemerging, Tai An 271016, Shandong, Peoples R China
Black flies;
cryptic species;
DNA barcoding;
shared haplotype;
GROUP DIPTERA-SIMULIIDAE;
POPULATION-GENETICS;
FLIES;
IDENTIFICATION;
CYTOTAXONOMY;
DIVERSITY;
SOFTWARE;
COMPLEX;
D O I:
10.4103/0972-9062.310862
中图分类号:
R51 [传染病];
学科分类号:
100401 ;
摘要:
Background & objectives: The black fly genus Simulium Latreille is one of the most important medical insect group of the family Simuliidae (Diptera) and many species of this genus are important pests of human and animals, while some of them also represent vectors of pathogens. Correct species identification is essential to the implementation of control measures for species of medical or agricultural importance. Methods: In this study, the usefulness of DNA barcoding was discussed in distinguishing species of Simulium. Results: Analysis showed hidden biodiversity, usually referred to in Simuliidae as cryptic species, which was detected in 15 species. Firstly, intraspecific divergences of eleven species was unexpectedly high and the maximum distances of them ranged from 5.1-16.8%. Based on the differential of K2P (Kimura 2-Parameter) distances, sequences were subdivided into two or three groups, respectively. Secondly, extremely low interspecific divergences were detected in eight groups of species, and shared haplotypes were also found among them. Furthermore, the subdivision within species and shared haplotypes among some species were all supported by the NJ (Neighbour-Joining) analysis. Interpretation & conclusion: Our results confirmed that DNA barcoding was a powerful tool for revealing hidden species diversity of black flies. Further work is needed to reveal ambiguous species delimitation in some problematic species groups.
机构:
Bharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, IndiaBharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, India
Kannan, M.
Anbalagan, S.
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机构:
Bharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, IndiaBharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, India
Anbalagan, S.
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机构:
Krishnan, M.
Muthukrishnan, K.
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机构:
Natl Coll, Post Grad & Res Dept Zool, Tiruchirappalli 620001, Tamil Nadu, IndiaBharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, India
Muthukrishnan, K.
Gokula, V.
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机构:
Natl Coll, Post Grad & Res Dept Zool, Tiruchirappalli 620001, Tamil Nadu, IndiaBharathidasan Univ, Dept Environm Biotechnol, Insect Mol Biol Lab, Tiruchirappalli 620024, Tamil Nadu, India
机构:
Mahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, ThailandMahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand
Thaijarern, Jiraporn
Sopaladawan, Piyamas Nanork
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机构:
Mahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand
Mahasarakham Univ, Fac Sci, Biodivers & Tradit Knowledge Res Unit, Maha Sarakham 44150, ThailandMahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand
Sopaladawan, Piyamas Nanork
Wongpakam, Komgrit
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机构:
Mahasarakham Univ, Walai Rukhavej Bot Res Inst, Maha Sarakham 44150, ThailandMahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand
Wongpakam, Komgrit
Pramual, Pairot
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机构:
Mahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand
Mahasarakham Univ, Fac Sci, Biodivers & Tradit Knowledge Res Unit, Maha Sarakham 44150, ThailandMahasarakham Univ, Dept Biol, Fac Sci, Maha Sarakham 44150, Thailand