Immobilized metal affinity chromatography and human serum proteomics

被引:38
|
作者
Wang, Fengrong [1 ]
Chmil, Christyne [2 ]
Pierce, Frank [2 ]
Ganapathy, Kulothungan [3 ]
Gump, Brooks B. [4 ]
MacKenzie, James A. [2 ]
Metchref, Yehia [3 ]
Bendinskas, Kestutis [1 ]
机构
[1] SUNY Coll Oswego, Dept Chem, Oswego, NY 13126 USA
[2] SUNY Coll Oswego, Dept Biol Sci, Oswego, NY 13126 USA
[3] Texas Tech Univ, Dept Chem & Biochem, Lubbock, TX 79409 USA
[4] Syracuse Univ, Dept Publ Hlth Food Studies & Nutr, Syracuse, NY 13244 USA
基金
美国国家科学基金会;
关键词
Immobilized metal affinity chromatography; Human serum; Proteomics; LC-MS/MS; ICP-MS; Metal binding proteins; SHOTGUN PROTEOMICS; ZINC CHELATE; ION BINDING; PROTEINS; IDENTIFICATION; CADMIUM; COPPER; IRON; ALPHA-2-MACROGLOBULIN; TRANSTHYRETIN;
D O I
10.1016/j.jchromb.2013.06.032
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Metal-binding proteins have a pivotal role in normal and diseased states. We used metal affinity chromatography to enrich a fraction of human serum proteins on immobilized columns loaded with cadmium, nickel, zinc, copper, or lead in bis-Tris saline and these proteins were identified using LC-MS/MS. Tens of enriched proteins were identified and we here present the 20 most abundant for binding each metal. The binding of various proteins (complement C3, alpha-2-macroglobulin, serum albumin, apolipoprotein B-100, complement component 48 preproprotein, apolipoprotein A-I, serotransferrin, alpha-1-antitrypsin, ceruloplasmin, 47 kDa protein, uncharacterized protein DKFZp686P15220, transthyretin, hemopexin, inter-alpha-trypsin inhibitor heavy chain H2, and histidine-rich glycoprotein) to different metals using immobilized metal affinity chromatography was compared to the literature. Although many metal-binding properties of these proteins have been confirmed, new metal-binding proteins have also been identified. The metal array use in the proteomic biomarker search technologies gives this data particular importance. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:26 / 33
页数:8
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