Structural Insight of the Full-Length Ros Protein: A Prototype of the Prokaryotic Zinc-Finger Family

被引:12
|
作者
D'Abrosca, Gianluca [1 ]
Paladino, Antonella [1 ,2 ]
Baglivo, Ilaria [1 ]
Russo, Luigi [1 ]
Sassano, Marica [1 ]
Grazioso, Rinaldo [1 ]
Iacovino, Rosa [1 ]
Pirone, Luciano [3 ]
Pedone, Emilia Maria [3 ]
Pedone, Paolo Vincenzo [1 ]
Isernia, Carla [1 ]
Fattorusso, Roberto [1 ]
Malgieri, Gaetano [1 ]
机构
[1] Univ Campania Luigi Vanvitelli, Dept Environm Biol & Pharmaceut Sci & Technol, Via Vivaldi 43, I-81100 Caserta, Italy
[2] CNR, SCITEC, Via Mario Bianco 9, I-20131 Milan, Italy
[3] CNR, Inst Biostruct & Bioimaging, Via Mezzocannone 16, I-80134 Naples, Italy
关键词
SINORHIZOBIUM-MELILOTI MUCR; LEGUMINOSARUM BV TRIFOLII; DNA-BINDING DOMAIN; H-NS; GALACTOGLUCAN BIOSYNTHESIS; STRUCTURE PREDICTION; SECONDARY STRUCTURE; MOLECULAR-DYNAMICS; REGULATOR MUCR; EXOPOLYSACCHARIDE;
D O I
10.1038/s41598-020-66204-5
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Ros/MucR is a widespread family of bacterial zinc-finger (ZF) containing proteins that integrate multiple functions such as virulence, symbiosis and/or cell cycle transcription. NMR solution structure of Ros DNA-binding domain (region 56-142, i.e. Ros87) has been solved by our group and shows that the prokaryotic ZF domain shows interesting structural and functional features that differentiate it from its eukaryotic counterpart as it folds in a significantly larger zinc-binding globular domain. We have recently proposed a novel functional model for this family of proteins suggesting that they may act as H-NS-'like' gene silencers. Indeed, the N-terminal region of this family of proteins appears to be responsible for the formation of functional oligomers. No structural characterization of the Ros N-terminal domain (region 1-55) is available to date, mainly because of serious solubility problems of the full-length protein. Here we report the first structural characterization of the N-terminal domain of the prokaryotic ZF family examining by means of MD and NMR the structural preferences of the full-length Ros protein from Agrobacterium tumefaciens.
引用
收藏
页数:10
相关论文
共 50 条
  • [31] Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin β
    Choi, Saehae
    Yamashita, Eiki
    Yasuhara, Noriko
    Song, Jinsue
    Son, Se-Young
    Won, Young Han
    Hong, Hye Rim
    Shin, Yoon Sik
    Sekimoto, Toshihiro
    Park, Il Yeong
    Yoneda, Yoshihiro
    Lee, Soo Jae
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2014, 70 : 1050 - 1060
  • [32] Structural analysis of the complex between calmodulin and full-length myelin basic protein, an intrinsically disordered molecule
    Viivi Majava
    Chaozhan Wang
    Matti Myllykoski
    Salla M. Kangas
    Sung Ung Kang
    Nobuhiro Hayashi
    Peter Baumgärtel
    Anthony M. Heape
    Gert Lubec
    Petri Kursula
    Amino Acids, 2010, 39 : 59 - 71
  • [33] Structural Influences: Cholesterol, Drug, and Proton Binding to Full-Length Influenza A M2 Protein
    Ekanayake, E. Vindana
    Fu, Riqiang
    Cross, Timothy A.
    BIOPHYSICAL JOURNAL, 2016, 110 (06) : 1391 - 1399
  • [34] Structural analysis of the complex between calmodulin and full-length myelin basic protein, an intrinsically disordered molecule
    Majava, Viivi
    Wang, Chaozhan
    Myllykoski, Matti
    Kangas, Salla M.
    Kang, Sung Ung
    Hayashi, Nobuhiro
    Baumgaertel, Peter
    Heape, Anthony M.
    Lubec, Gert
    Kursula, Petri
    AMINO ACIDS, 2010, 39 (01) : 59 - 71
  • [35] A Mini Zinc-Finger Protein (MIF) from Gerbera hybrida Activates the GASA Protein Family Gene, GEG, to Inhibit Ray Petal Elongation
    Han, Meixiang
    Jin, Xuefeng
    Yao, Wei
    Kong, Lingjie
    Huang, Gan
    Tao, Yujin
    Li, Lingfei
    Wang, Xiaojing
    Wang, Yaqin
    FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [36] Structural Modeling and Functional Annotation of Zinc-finger DHHC Domain Containing Uncharacterized Protein of Colletotrichum gloeosporoides Reveal it as an Effector Protein Contributing to Pathogenicity
    Abdullah
    PAKISTAN JOURNAL OF AGRICULTURAL SCIENCES, 2024, 61 (02): : 665 - 670
  • [37] Structural insights into the activity regulation of full-length non-structural protein 1 from SARS-CoV-2
    Wang, Ying
    Kirkpatrick, John
    zur Lage, Susanne
    Carlomagno, Teresa
    STRUCTURE, 2023, 31 (02) : 128 - +
  • [38] Structural analysis of full-length SARS-CoV-2 spike protein from an advanced vaccine candidate
    Bangaru, Sandhya
    Ozorowski, Gabriel
    Turner, Hannah L.
    Antanasijevic, Aleksandar
    Huang, Deli
    Wang, Xiaoning
    Torres, Jonathan L.
    Diedrich, Jolene K.
    Tian, Jing-Hui
    Portnoff, Alyse D.
    Patel, Nita
    Massare, Michael J.
    Yates, John R., III
    Nemazee, David
    Paulson, James C.
    Glenn, Greg
    Smith, Gale
    Ward, Andrew B.
    SCIENCE, 2020, 370 (6520) : 1089 - +
  • [40] Erratum to: Structural analysis of the complex between calmodulin and full-length myelin basic protein, an intrinsically disordered molecule
    Viivi Majava
    Chaozhan Wang
    Matti Myllykoski
    Salla M. Kangas
    Sung Ung Kang
    Nobuhiro Hayashi
    Peter Baumgärtel
    Anthony M. Heape
    Gert Lubec
    Petri Kursula
    Amino Acids, 2010, 39 (1) : 73 - 74